Variovorax paradoxus EPS: Varpa_4176
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Entry
Varpa_4176 CDS
T01392
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4176
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_4176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADU38346
UniProt:
E6V750
LinkDB
All DBs
Position
complement(4510510..4512699)
Genome browser
AA seq
729 aa
AA seq
DB search
MIQFTRTAIAVAAVTAFQAAYAQGNSTNAELGAVTIEGSRDANSLHLEESSGAASRLGLS
VRETPASVEILSQDAIQQRGARTFSEALRGMAGLSGGGPPSSPTTLSTRGFTSLMYLYDG
VRSSGAGVVNRVQDTWNYDRIEVLKGPASVLDGEGAIGGVVNFVTKRPDRDNPHKEALLS
YGSYGSTRAAFGFGGALGDASAYRLDYSRNDSKVGTIDRNGERIDHFTSGLMVDLGGSVK
LDLSFDYLRDNNDAYWGTPLVPRSFATQPTNVVSTPDGRVIDRRMTRTNYNVLDDDNSSE
TYWLRARLTGQLDGGWSWRNEFSANKSNRVFRNSESATFVAPSSIARDQTLITHDQDFWL
DRIDATHKGTIGGMDNRLVVGGEYSETRFGSQRRFSNSSASTASLLRVPVFDPYVGFFNN
DPALSVGGGNRTDMHTKVRVSSVFVEDALKPIRNLTLVGGLRHDRTEVDRSITDLNLGSN
TRFGSSYRSTSGRLGAVYDITPQSSIYAQYTNATLPVNSLFLLSASNAAFPMSRGKQAEV
GFKQSLPEANLEWTAAAYKIELDNVLSRDPANAANTVNNGRQSSRGLELSAVWKPTREWT
LAGNLAALDARFDTLVEAGNVSRVGKTPPNVPERVANVFATYRPDNSKLEYFVSLNRTGH
MFTDTANQIRINGYTTMDAAVSYRLKNALLSFRVRNLTDKLYATWVGRATSQVLLAPRRT
FEVSAKFDF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatccagttcacccgcacggccatcgccgtggccgccgtcacggccttccaggcagcg
tatgcacaaggcaacagcaccaacgcagaactcggcgccgtcaccatcgaaggcagccgc
gatgccaacagcctgcacctcgaggagtcgagcggcgccgcttcgcgtctcggcctttcg
gtgcgcgagacgccggcctccgtcgagatcctgtcgcaggacgcgatccagcagcgcggc
gcgcgcaccttcagcgaagcgctgcgcggcatggcgggtttgtcgggcggcggcccgccg
tcgtcgccgacgacgctttccacgcgcggcttcaccagcctcatgtacctctacgacggc
gtgcgcagctccggcgcgggcgtcgtcaaccgcgtgcaggacacctggaactacgaccgc
atcgaagtgctgaaggggcctgcctcggtgctcgacggcgagggcgccatcggcggcgtc
gtcaacttcgtgaccaagcggcccgaccgcgacaacccgcacaaggaagcgctgctctcg
tacggcagttacggctccacgcgcgcggccttcggtttcggcggcgccctcggcgatgcc
agcgcctaccggctggactacagccgcaacgacagcaaggtcggcaccatcgaccgcaac
ggcgagcgcatcgatcacttcaccagcggcctgatggtcgacctcggcggctcggtgaag
ctggacctctcgttcgactacctgcgcgacaacaacgacgcctactggggcacgccgctc
gtgccgcgcagcttcgccacccagccgacgaacgtggtgagcacgcccgacggccgcgtg
atcgaccggcgcatgacgcgcaccaactacaacgtgctggacgacgacaactcctccgaa
acctactggctgcgcgcgcgcctcacgggccagctcgacggcggctggtcgtggcgcaat
gagttctcggccaacaagtcgaaccgcgtgttccgcaattccgaaagcgctaccttcgtg
gcgccgtccagcatcgcgcgcgaccagaccctgatcacgcacgaccaggacttctggctc
gaccgcatcgacgccacgcacaagggcacgatcggcggcatggacaaccgcctcgtcgtc
ggcggcgaatacagcgagacgcgcttcggcagccagcgccgcttctcgaacagcagcgcc
agcacggcgagcctgctgcgggtgccggtgttcgacccctacgtgggcttcttcaacaac
gacccggcgctcagcgtgggcggcggcaaccggaccgacatgcacaccaaggtgcgggtc
agttcggtcttcgtcgaagacgcgctcaagccgattcgcaacctcacgctggtcgggggc
ctgcgccacgaccgcaccgaggtcgatcgttcgatcaccgatctcaacctgggcagcaac
acgcgcttcggcagcagctaccgttcgacttcgggccgcctcggcgcggtgtacgacatc
acgccgcaatcgagcatctatgcgcagtacaccaacgccacgctgccggtgaattcgctc
ttcctcctgtcggcatccaacgcggcatttccgatgtcgcgcggcaagcaggcggaggtg
ggcttcaagcagagcctgcccgaagcgaatctggagtggaccgcggccgcctacaagatc
gagctcgacaacgtgctctcgcgcgatccggccaacgcggccaatacggtgaacaacggg
cgccagtcatcgcgcggcctagagctgtcggcggtgtggaagcccacgcgcgaatggacg
ctggcaggcaacctcgccgctctcgatgcgcgcttcgacacgctggtggaggcgggcaac
gtctcgcgcgtcggcaagaccccgcccaacgtgcccgagcgcgtggccaatgtcttcgcg
acctaccggcccgacaactcgaagctcgaatatttcgtgtcgctcaaccgcaccggccac
atgttcaccgacaccgccaaccagatccgcatcaacggctacaccaccatggatgcggcg
gtgagctaccggttgaagaacgcgctgctcagcttccgcgtgcgcaacctgaccgacaag
ctctacgccacctgggtggggcgtgccaccagccaggtgctgcttgcgccgcgccgtacc
ttcgaggtgtcggccaagttcgacttctag
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