Variovorax paradoxus EPS: Varpa_4268
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Entry
Varpa_4268 CDS
T01392
Name
(GenBank) MATE efflux family protein
KO
K26937
MATE family, multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4268
Transporters [BR:
vpe02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Varpa_4268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ADU38437
UniProt:
E6V885
LinkDB
All DBs
Position
complement(4593308..4594726)
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AA seq
472 aa
AA seq
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MTTSANTELDPRTRLLLEAPIVPTLLRLAAPNVLVMVAQASVGLIETYFVGKLGTDALAG
MALVFPIVMLMQMTSSGAVGGGIAASIARALGARRRDDANALVWHAVVIALGFGLCFTLA
LLFGGRWLYGIMGGAGASLDAALTYSNWVFAGAVLVWLFNSLAAIIRGTGNMSVPANVTV
VGVVFLIPASPLLIFGWGPIPGMGIAGGAMALLLYYLLGSIALIVYLRSPRSLLKPTLSA
LKLRWALFRDILRIGLVGAVSTVATNLSIGIATALTGHFGPGALAGYGTASRLEYLLVPL
VFGLGAPLVAMVGTCMGAGQRERALRATWAGAALAFALTETIGLAAALFPRPWLLLFGND
PAMLETGAHYLRVVGPLYGFFGVGLVLYFASQGAGRLMWPVLGNIARLAVAGTGGWLALR
WGGGLTGVFAAQGVALVVYGIVIASAIAGGAWFGRVGWPRTPTGLLRRVAQA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctccgccaacaccgagctcgacccgcgcacgcgcctcttgctcgaagcgccc
atcgtgcccacgctgctgcgcctggcagcccccaacgtgctcgtgatggtggcgcaagct
tccgtcgggctcatcgagacctacttcgtcggcaagctcggcaccgacgcgctcgccggc
atggcgctcgtgttcccgatcgtgatgctgatgcagatgacctccagcggcgcggtcggc
ggcggcatcgctgcctcgattgcacgcgcgctcggcgcccgccgccgcgacgacgccaat
gcgctcgtgtggcatgcggtggtcatcgcgctgggcttcggcctgtgcttcacgctcgcg
ctgctgttcggcgggcgctggctctacgggatcatgggcggcgcgggcgcttcgctcgat
gcggcgctgacgtattcgaactgggtgttcgcgggcgcggtgctcgtgtggctcttcaac
tcgctcgccgcaatcattcgcggcaccggcaacatgtcggtgccggccaacgtgacggtg
gtgggcgtggtgttcctcattccggcgtcgccgctcctcatcttcggctggggtccgatt
ccgggcatgggcatcgcgggcggcgcgatggcgctgctgctgtactacctgctgggctcc
atcgcactcatcgtctacctgcgttcgccgcgcagcctgctcaagccgacgctttcggcg
ctgaagctgcggtgggcgctgttccgcgacatcctgcgcatcgggcttgtgggagcggtg
tcgacggtggcgaccaatctgtcgatcggcattgcgaccgcgctcacggggcacttcggc
ccgggtgcgctggccggctacggcacggcgtcgcggctcgaatacctgctggtgccgctg
gtgttcggcctgggcgcgccgctggtcgcgatggtcggcacctgcatgggcgcggggcag
cgcgaacgcgcgctgcgcgccacctgggccggcgcggcgctggcctttgcgctgaccgag
accatcggcctcgcggccgcgctgttcccgcgtccctggctgctgctgttcggcaacgac
ccggcgatgctggagaccggcgcgcactacctgcgcgtggtggggccgctctatggcttc
ttcggtgtggggctcgtcctgtacttcgcctcgcagggcgcgggccggctgatgtggccg
gtgctcggcaacatcgcacggctcgccgtggcgggcacgggcggctggcttgcgctgcgt
tggggcggcgggctcaccggcgtgttcgctgcgcaaggtgtggcgctggtggtgtacggc
atcgtgatcgcgtcggcgatcgcaggcggcgcttggttcgggcgcgtgggctggccacgc
acgccgacgggtttgctgcggcgggttgcgcaggcctga
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