Variovorax paradoxus EPS: Varpa_4283
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Entry
Varpa_4283 CDS
T01392
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00030
Pentose phosphate pathway
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Module
vpe_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Varpa_4283
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
Varpa_4283
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Paralog
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ADU38452
UniProt:
E6V8A0
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All DBs
Position
complement(4607137..4608972)
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AA seq
611 aa
AA seq
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MSSTHPTVRDVTDRIRERSHGTRSAYLARLAEIRGRDRGSERMGCANVAHAVAGIPANDK
FKVVTERAPNLGIVTAYNDMLSAHAPYQGYPDIIKQEARRLGATAQVAGGVPAMCDGVTQ
GTPGMELSLFSRDVIAMSTAIALTHDMFDGALMLGVCDKIVPGLLIGALHFGHLPTVFVP
AGPMPSGLSNNAKSKVREQAAQGLVGRQGLLDAEMAAYHTVGTCTFYGTANSNQMLLEAM
GLHVPGTAFIQPGDAMRETLTREAVRTVLGKAGETAFNCPPIGEMVDERCIVNAMAALLA
TGGSTNHLIHWVAVARAAGIVIDWDDFSKLSDIIPLLTRVYPNGSADVNEFQAAGGPGFV
IGELVDAGLMHADVLTVRAGGIREFANIPTLADSGEQRLSWTPAAPSKNDAVARTVAEPF
SATGGLKLLSGNLGRSVIKVSSVPDDRHVIEAPARVFDSQAALHKAFTAGELERDVVCVV
RWQGPQANGMPELHKLTPPLSVLQGKGFRVALVTDGRMSGASGKIPAAIHVSPEAAAGGP
LAKVRDGDVIRLDAVAGTLAVLLPEDEWAARETATLPEAQRIADGHGLGRELFAGMRRNA
LTAEEGACSWL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacacaccccaccgtccgcgacgtcaccgatcgcatccgcgagcgcagccat
ggcacgcgcagcgcctacctcgcacggctcgccgaaatccgcggccgcgaccgcggttcc
gagcgcatgggctgcgccaacgtggcgcatgccgtggccggcatcccggccaacgacaag
ttcaaggtggtgaccgagcgcgcacccaacctcggcatcgtcaccgcctacaacgacatg
ctctcggcccacgcgccgtaccagggctacccggacatcatcaagcaggaggcgcggcgc
ctcggcgccaccgcgcaggtcgcgggcggcgtgccggcgatgtgcgatggcgtcacgcag
ggcacgcccggcatggagctgagcctcttcagccgcgacgtcatcgccatgagcaccgcg
atcgcgctcacgcacgacatgttcgacggcgcgctgatgctcggcgtgtgcgacaagatc
gtgcccggcctcctgatcggcgcgctgcacttcggccatctgccgaccgtgttcgtgccc
gcggggccgatgccctcaggcctctcgaacaatgccaagtcgaaggtgcgggagcaagcg
gcgcagggcctcgtgggccggcaggggctgctcgatgccgagatggcggcgtatcacacg
gtaggcacctgcaccttctacggcaccgccaacagcaaccagatgttgctcgaagccatg
ggcctgcatgtgcccggcacggccttcatccagcccggcgatgcgatgcgcgaaacgctc
acgcgcgaggcggtgcgcaccgtgctgggcaaggcgggcgagactgccttcaactgcccg
cccatcggcgagatggtcgacgagcgctgcatcgtgaatgcgatggccgcgctgctggcc
accggcggttcgacgaaccatctgatccactgggtggccgtggcccgcgccgcgggcatc
gtgatcgactgggacgacttctcgaagctctcggacatcattccgctgctgacccgcgtg
taccccaatggcagcgccgacgtgaacgagttccaggccgcgggcggccccggcttcgtg
atcggcgagctggtcgatgcgggcctgatgcacgccgacgtgctcaccgtgcgcgccggt
ggcatccgcgaattcgccaacattccgacgctggccgacagcggcgagcagcgcctgagc
tggacgcccgccgccccgtcgaaaaacgacgcggtcgcacgcaccgtggccgagccgttc
agcgccaccggcggcctgaagctcctcagcggcaacctgggccgcagcgtgatcaaggtt
tcctccgtgcccgacgaccgccatgtgatcgaagcgcccgcccgcgtgttcgactcgcag
gccgccctgcacaaggctttcaccgccggcgaactggagcgcgacgtggtctgcgtggtg
cgctggcagggcccgcaggccaatggcatgcccgagctgcacaagctcacgccgccgctc
tcggtgctgcaaggcaagggctttcgcgtcgcgctggtcaccgatggccgcatgagcggt
gcgtcgggcaagattccggcggccatccacgtgtcgcccgaagcggccgcgggcggcccg
ctggccaaggtgcgcgacggcgacgtgatccgcctcgatgcagtggcgggtacgctcgcc
gtgctgctgcccgaagacgaatgggccgcgcgcgaaaccgcgacgctgcccgaagcgcag
cgcatcgccgacggacacggcctcggccgcgaactgttcgccggcatgcgccgcaatgca
ctcaccgctgaagaaggagcctgctcatggctgtag
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