Variovorax paradoxus EPS: Varpa_4318
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Entry
Varpa_4318 CDS
T01392
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4318
Transporters [BR:
vpe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Varpa_4318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Bacillus_HBL
BicD
Motif
Other DBs
NCBI-ProteinID:
ADU38487
UniProt:
E6V972
LinkDB
All DBs
Position
complement(4647819..4648967)
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AA seq
382 aa
AA seq
DB search
MRRIVPLVLVLLLAVVGGSLLWARRPAAAVESVPVVRATIESSVTALGVLQPRRYVDVGA
QVSGQILRLQVQPGDVVTKGQLLVEIDPSVQRATVDAGRASLAGLRAQLADQRAQHRLAG
QQHARQRQMASDGATREEDVQGAEATLASAAARIDNLDAQIAQTQATLKADEARLGYTRI
YAPMAGTVVSVEAREGQTLNATYQTPNVLRIADLSSMTVWSEVSEADVRRVKPGMPVYFT
TLGADQRRWQGTVRQLLPAPPTPAPKAGGSESGATPSAAGSKVVVYTALFDVDNADGALM
PQMTAQVAFVEASAKDVATVPTAALVPVVGGGSDRFTARVLRDDGTHEVRPLRIGVRNRV
LAEVVHGAQVGDRIVTGDVVKP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaatcgttcctctcgttcttgttcttcttctggccgtggttggcggcagcctc
ctctgggcgcgccgtcccgccgccgcggtcgagtccgtgccggtggtgcgcgcgaccatc
gaatccagcgtcaccgcgctcggcgtgctccagccgcggcgctatgtcgatgtcggtgcc
caggtgtcggggcagatcctgcgcctgcaagtgcagcccggcgacgtcgtgaccaagggg
cagttgctggtcgagatcgaccccagcgtgcagcgcgccaccgtcgatgcgggccgggct
tcgctggccggtttgcgcgcacagctcgcagaccagcgcgcccagcatcgcctggccggg
cagcagcatgcgcgtcagcgccagatggcctccgacggcgccacgcgcgaggaagacgtg
caaggtgccgaagccaccctggcttccgccgccgcgcgcatcgacaacctcgatgcccag
atcgcacagacccaggccacgctcaaggccgacgaggcgcgcctgggctacacgcgcatc
tatgcgccgatggccggtacggtcgtttccgtggaagcgcgggaaggccagaccctcaat
gccacctaccagacgcccaacgtgctgcgcatcgcggacctgtcgtccatgacggtgtgg
tccgaggtgtcggaggccgacgtgcggcgcgtcaagccgggcatgccggtgtacttcacc
acgctgggcgccgaccagcgtcgctggcagggcacggtgcgccagttgctgcccgcgccg
ccgaccccggcgcccaaggccggcggcagcgaaagcggcgccacgccatcggcggcgggc
agcaaggtcgtggtctacaccgcgctgttcgatgtcgacaacgccgatggcgcactgatg
ccacagatgacggcccaggtcgccttcgtcgaagcctccgccaaagacgtggccactgtt
cccacggccgcgctcgtgccggtagtcggtggcggcagcgaccgcttcaccgcgcgggtg
ctgcgcgacgacggcacgcacgaggtccggccgttgcgcatcggtgtgcgcaaccgggtg
ctggccgaagtcgtccacggtgcgcaggtcggcgatcgcatcgtcaccggtgacgtcgtg
aagccatga
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