Variovorax paradoxus EPS: Varpa_4326
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Entry
Varpa_4326 CDS
T01392
Name
(GenBank) Beta-ketoacyl synthase
Organism
vpe
Variovorax paradoxus EPS
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
KAsynt_C_assoc
PP-binding
CurL-like_PKS_C
adh_short
RhiE-like_linker
adh_short_C2
Beta-ketacyl_N
Thiolase_N
Epimerase
Motif
Other DBs
NCBI-ProteinID:
ADU38495
UniProt:
E6V980
LinkDB
All DBs
Position
complement(4683485..4688113)
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AA seq
1542 aa
AA seq
DB search
MTTAFNESVEPTGLEIAIVGLSGRFPGADDVDAFWRNIEGGVESVSRFTDEQLRERGVPQ
SLLDDPDYVKAGVMFEGFDQFDAGFFGYTPREAENLDPQQRVFLECASAALEHAGCDPER
WPGKVGVYAGEGANVYLIRNLLPSFGLGAHTGIADLLGLMSGNSGGSLCTRVAYKLNLRG
PAVSVQTACSTSLTAVHTACQALLSHDCDMALAGGVWLNLLQEGGYRYQAGAILSPDGHC
RAFDADAAGTVIGSGAGVVSLKRLDEALRDGDTIHAVIKGTAANNDGSAKVGFTAPSIDG
QAEVIRAAQLIAGVSADTIGYIETHGTGTTLGDPIEIAALTQAFRADTERRGFCAVGSVK
TNIGHLDAAAGVAGLIKATMALKHGVLPPSLHFTKPNPQIDFASSPFYVNAQRQPWPEGR
TPRRAGVSSFGIGGTNVHVVLEEAPVARPSAQAKAPAWQILPLSARNTDALQQAAQRLAS
HLEEAGSGTSLADVAQTLQTGRRALAVRGAVVADGSATAVEALRAPESDFDQASGIPASA
PEVAFLFPGGGTQHANMGLALYRDHPAFRQEIDRCCDALRDAMGMDLRQLLYPAVGGEAA
ADEKLGRIEYTQPLLFIVEYAMARLWMSRGVQPAVMLGHSLGEYVAACLAGVFSLEDALR
IVATRGRLMQSMAPGAMTAIALSESELAPFLATGCDIAAINGEQLCVLAGPMAAIEAAEQ
QLFARGLMPRRLLVSIASHSAMTESIVAELQQVVASVPRSAPRIPFISNVTGKPITAQQA
VDPAYWGQHLRGTVRFADGMAELLRVQGRVLLEVGPGETLAGLARQHPLADSAAAILSSQ
AHPQKQAQNERQMASVIGQLWCAGVDIDWAACHPGRQARRVPLPTYPFQRRSYWTDMPEA
GSEAATSPVQKPGDPFHVPVWQRTEPAGMPTALTPADGCTLVFAETSGLTDALIRQLQAE
APAHPVFRVTPGSGYAETGAHQFTVRPGERADHEELLRKVQAESGPVAKVYHLWSVDGQP
SSSSSLPQSEDVLERGYFSLLALIQAIDSTSGGRARELSIEVIANQIEDASGLEPLCPEK
ATLFSLCKVIAQEYPHIACRVTDIVLPVPGSAAEAWLARQLAAPAQAPHDETLVAYRGPH
RWVKTYAPLPSGSAPQQRLRSKGVYLITGGLGGVGLAVARHLAESWQARLVLLGRTPLPE
RSEWEALVADEAQPQALRTRLAQLIELENLGGEVLVVAADVADAASMQAAVAEARARFGM
VQGVVHAAGHANSGMIATRTRAAIDEVFAPKLQGTRFLLDALRDEPLDFVLLCSSISSMA
GGLGMSDYAAANAYLDGLAALWQRSATYPVISVNWDAWRDLGMAAGRVLPDGIGMDGPEG
ARAVERIVNGPAFAQVVISTTDLNQRLGELDNGMLDLLETGPAAKKKRREHPRPALATPF
VAPEGELENVLAGIWQDMLGIASVGIDDNLFELGGDSLLAIQILARARKAYEVELHPAAF
FKAPTLRDLAILVETRLIEEIEAAAPLDAPADAEPDRSPAFV
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccttcaacgaatccgtcgaacccaccggcctggaaattgccatcgtcggc
ctgtcggggcgcttccccggtgctgacgacgtggacgccttctggcgcaacatcgagggc
ggcgtggaatcggtatcgcgcttcaccgacgagcaactgcgcgaacgcggcgtgccgcaa
agcctgctggacgatcccgactacgtgaaggccggcgtgatgttcgaaggcttcgaccag
ttcgatgccggcttcttcggctacacgccccgcgaagccgagaacctcgatccgcagcag
cgcgtgtttctcgaatgcgcctcggcagcgctcgaacatgccggctgcgaccccgagcgc
tggccgggcaaggtcggcgtgtatgcgggcgagggcgccaacgtctacctgatccgcaac
ctgttgccgtccttcggcctcggtgcgcacaccggcattgccgacctgctcggcctcatg
agcggcaactccggcgggtcgctctgcacgcgcgtggcctacaaactgaacctgcgcggc
ccggccgtgagcgttcagaccgcctgctcgacctcgctcacggcagtgcacaccgcctgc
caggcgctcctgagccacgactgcgacatggccctggccggcggcgtgtggctcaacctg
ctgcaagagggcggctaccgctaccaggccggcgcgatcctctcgcccgacggccattgc
cgcgccttcgatgccgatgcggccggcacggtgatcggcagcggcgccggcgtcgtctcg
ctcaagcgcctcgacgaagcgctgcgcgacggcgacaccatccatgctgtcatcaagggc
accgcggccaacaacgacggctcggccaaggtcggcttcaccgcacccagcattgacggg
caggccgaggtcatccgcgcggcgcaactgatcgcgggcgtctcggccgacaccattggc
tacatcgagacgcacggcaccggcaccacgctgggcgacccgatcgagatcgcggcgctc
acgcaggccttccgcgccgacaccgagcggcgcggcttctgcgcggtcggttcggtcaag
accaacatcggccacctcgatgcggcggccggcgtggcggggctcatcaaggccacgatg
gcgctcaagcacggcgtgctgccgcccagcctgcatttcacgaagcccaacccgcagatc
gatttcgcgagcagtccgttctatgtgaacgcgcagcgccagccctggcccgaaggccgc
acgccgcgccgcgcgggcgtgagttcgttcggcatcggcgggaccaacgtgcatgtggtg
ctcgaagaggcaccggtggcccgtccgtctgcacaagcgaaggcaccagcctggcagatc
ttgccgctctccgcccgcaacaccgacgccctgcagcaagccgcgcagcggctggccagt
catctcgaagaagcaggctccggcacatcgctcgccgatgtcgcgcagacgctgcagacc
ggccggcgcgcgctggcggttcgcggcgcagtcgttgccgacggatcggcaaccgccgtc
gaggcgctgcgtgcgcccgaaagcgacttcgaccaggcgagcggcattcccgcgtcggcg
cccgaggtcgcgttcctgttcccgggcggcggcacgcagcacgcgaacatggggctcgcg
ctgtaccgcgaccatccggcgttccgccaggagatcgatcgctgctgcgacgcgctgcgc
gatgcgatgggcatggacctgcggcaactgctctacccggccgtcggcggcgaagctgct
gccgacgagaagctcggtcgcatcgaatacacacagccgctgctgttcatcgtcgagtac
gcgatggcgcgcctgtggatgtcgcgcggcgtgcagccggccgtgatgttgggccacagc
ctgggcgagtacgtggccgcgtgtctggccggcgtgttcagcctggaagatgcgctgcgc
atcgttgccacgcgcgggcggctgatgcagtcgatggcgccgggcgcgatgaccgccatc
gcgctgtcggaatccgaactcgcgccgttcctggccaccggctgcgacatcgcggcgatc
aatggcgagcaactgtgcgtgctcgccgggccgatggcggccatcgaggcggccgagcag
cagctgttcgcgcgcgggctgatgccgcgccgcctgctggtctcgatcgcctcccattcg
gcgatgaccgagtccatcgtggccgagctgcagcaggtggtcgcttccgtgccgcggtcc
gcgccccgcattcccttcatctccaacgtcaccggcaagcccatcactgcgcagcaggcg
gtcgatccggcctactggggccagcacctgcgcggcacggtgcgcttcgcggacggcatg
gcggaactgctgcgcgtccaaggccgcgtgctgctcgaagtcggtcccggcgagacgctg
gccggcctcgcgcgccagcacccgctggccgattcggcggcggccatcctgtcgagccag
gcccatccgcagaagcaggcacagaacgaacgccagatggcgagcgtgatcggccaactc
tggtgcgcgggtgtcgatatcgattgggctgcgtgccatccgggacggcaggcacgccgc
gtgccgctgccgacctatccgttccagcgccgctcctattggacggacatgcccgaggcg
ggcagcgaagcggcgacctcgcccgtgcagaagccgggcgatccattccacgtgccggtc
tggcaacgtacggagcccgcgggtatgccaacggctcttacgccggccgacggctgcacg
ttggtgttcgcggagacgagcggcttgaccgacgccctgattcgccaattgcaggccgaa
gcgcccgcgcacccggtgttccgcgtgacgccggggagcggctatgccgaaacgggagcg
caccagttcacggtacgcccgggcgagcgtgcggatcacgaagagctcctgcgcaaggtg
caggccgaatccggaccggtcgccaaggtctatcacctgtggagcgtggacggccagccg
tcgtcttcgtcgtctttgccgcaatcggaggacgtgctcgagcgcggctacttcagcctg
ctggcgctgattcaggccatcgacagcacctctggcggacgtgcgcgcgagctctcgatt
gaagtcatcgcgaaccagatcgaagacgcctccggcctcgagccgctgtgccccgagaag
gcgacgctgttcagcctctgcaaggtgatcgcgcaggagtatccgcacatcgcttgccgg
gtgacggacatcgtgttgcccgtgccgggcagcgctgctgaagcatggctggcacggcag
ctcgccgcgccggcgcaggcgccgcacgacgaaacgctcgtggcctatcgcggcccgcat
cgctgggtcaagacctatgcgccgctgccgtccggctccgcgccgcaacagcgcctgcgc
tccaagggcgtctacctgatcaccggcggtctcggcggcgtggggctcgcggtcgcgcgg
cacctggccgagtcatggcaggcgcggctggtgctgctgggacgcacaccgctgcccgaa
cggagcgagtgggaggctctcgtcgccgacgaagcgcaaccccaggcgctgcggaccagg
ctcgcgcaactgatcgaactcgaaaatctcggcggcgaagtgctcgtcgtcgctgccgac
gtggccgatgcggcctcgatgcaagccgccgtcgcagaggcccgcgcccgcttcggcatg
gtgcagggcgtggtgcatgcggccggtcacgcgaacagcggaatgatcgcaacccgcacc
cgcgccgcaatcgacgaagtcttcgcccccaagttgcaaggcacgcgctttctgctcgac
gcactgcgcgacgagccgctcgatttcgtgctgctgtgctcgtcgatctccagcatggcc
ggtggcctcggcatgagcgactacgccgccgcgaacgcctacctcgacgggctggccgca
ctgtggcaacgcagtgcgacgtaccccgtcatctcggtcaactgggacgcctggcgcgac
ctcggcatggccgcaggccgcgtgctgcccgacggcatcggcatggacggacccgagggc
gcgcgggcggtggaacgcatcgtcaacggcccggcgttcgcgcaggtcgtgatctccacc
accgacctgaaccaacggctcggcgaactggacaacggcatgctcgacctgctggagacc
ggcccggccgcgaagaagaagcgccgcgaacatccgcgccccgcgctggccacacctttc
gtcgcgccggaaggcgagctggagaacgtgctcgcgggcatctggcaggacatgctgggc
attgccagcgtcggcatcgatgacaacctgttcgagctgggcggcgactcgctgctcgcg
atccagatcctggcgcgggcccgcaaggcctacgaagtcgaactgcatccggccgccttc
ttcaaggcacccaccctccgcgaccttgcgatcctggtcgagacccggctgatcgaggaa
atcgaggccgccgcacccctcgatgcgccggccgatgccgaacccgatcgctcgcccgca
ttcgtctga
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