Variovorax paradoxus EPS: Varpa_4421
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Entry
Varpa_4421 CDS
T01392
Name
(GenBank) major facilitator superfamily MFS_1
KO
K08172
MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4421
Transporters [BR:
vpe02000
]
Major facilitator superfamily (MFS)
Organic acid transporters
Metabolite:H+ symporter (MHS) family [TC:
2.A.1.6
]
Varpa_4421
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GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
ADU38589
UniProt:
E6VAB7
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Position
4796258..4797589
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AA seq
443 aa
AA seq
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MSATDEKAIRRVVISALVGATIEWYDFFLYGVVAGIVFSKLYFPGSDPVVSVLLAYTTFA
VGFVTRPLGGVIFGHFGDKIGRKSMLIITLMIMGVATFLIGLVPTYAQIGIAAPVLLLLL
RVAQGIGLGGEWGGAVLMAYEYAPKDKRGFYASLPQIGLAIGLCLASGVVALLSSLLTDE
QFMSWGWRIAFLISGVMVLVGMYIRLHVQETPEFAAVKARNAELRIPFMDMLRRYPGNVL
KGMGARYIDGVFFNIFGVFSINYLTSTIKISRTDALLGVMAAAVVMIFFIPFFGRMSDKV
GRGKVYMWGSLITAVSAFPGFWLMTHSGGNVLLVWLAIIVPFGILYASVYGPEAALFCDL
FDAKVRYTGISFVYQFSGIFASGITPIIATALLKSGGGEPWQICMYVLFAGVVSALCAWM
IGRSPSPADAVDTADAPVVTASR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaccgacgagaaagcgattcgcagggtggtcatctccgccctggtgggcgcc
accatcgagtggtacgacttctttttgtacggcgtggtggccggcatcgtgttcagcaag
ctgtactttccgggcagcgacccggtggtgtcggtgctgctggcctacaccaccttcgcg
gtgggcttcgtcacgcggcctttgggcggcgtgatcttcggccacttcggcgacaagatc
ggccgcaagagcatgctcatcatcacgctgatgatcatgggcgtggccaccttcctcatc
ggcctcgtgccgacctatgcgcagatcggcatcgcggcgcccgtgctgttgctgctgctt
cgcgtggcacagggcatcggccttggtggcgaatggggcggcgcggtgctcatggcgtat
gaatacgcgccgaaggacaagcgcggcttctatgcgtcgctgccgcagatcgggctggcc
atcggcctgtgtctggcctcgggcgtggtggcgctgctgtcgtcgctgctcaccgacgag
cagttcatgtcgtggggctggcgcatcgcgttcctgatttccggcgtgatggtgctggtg
ggcatgtacatccgcctgcacgtgcaggaaacgcccgagttcgcggcggtgaaggcgcgc
aacgccgagctgcgcattccattcatggacatgctgcgccgctacccgggcaatgtgttg
aagggcatgggcgcgcgctacatcgacggcgtgttcttcaacatcttcggcgtgttctcg
atcaactatctcaccagcaccatcaagatcagccgcaccgatgcgttgctgggcgtgatg
gcggcagcggtggtgatgatcttcttcatccccttcttcggccgcatgtccgacaaggtg
ggacgcggcaaggtctacatgtgggggtcgctcatcaccgcggtgtcggcgtttccgggc
ttctggctcatgacgcacagcggaggcaacgtgctgctggtgtggctcgcgatcatcgtg
cccttcggcatcctgtatgcctcggtgtacgggcccgaagccgcccttttctgcgacctg
ttcgatgcgaaggtgcgctacacgggcatcagcttcgtctaccagttctcgggcatcttc
gcctcgggcatcacgccgatcatcgcgaccgcgctgctgaaatcaggtggcggcgagccg
tggcagatctgcatgtatgtgctgttcgcgggcgtggtgtcggcgctgtgcgcgtggatg
atcgggcgcagcccatcgccggcggatgcggtcgatacggcggatgcgcccgttgtcacc
gcttcgcgctga
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