Variovorax paradoxus EPS: Varpa_4439
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Entry
Varpa_4439 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02034
peptide/nickel transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_4439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4439
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_4439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF5862
Motif
Other DBs
NCBI-ProteinID:
ADU38607
UniProt:
E6VB77
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All DBs
Position
4815518..4816432
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AA seq
304 aa
AA seq
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MSKVITMPSVAASSKPTKAAPVVRVEHPGTEAMRMFLRNPAAIAGMVMLVLMLAVAIAGP
WLYPADPFEIKTAPLTPPFSEDAWLGSDYLGRDVLTALIYGGRATLLVGAVAALLSVVIG
ITLGAFAGYYGGKVDAALMKLTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGIVSWTGT
ARLTRAEFMKYRGLEFVRAERAIGARDARIIWKVILPNALPPLVVSATLAIGAAILFEAG
LSFLGLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFITVLAVSLIGDGLNDALNPK
LRER
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtgatcacgatgccttctgtcgccgcatcttcaaagcccaccaaggccgcg
cccgtggtgcgggtggagcacccgggcacggaagcgatgcgcatgttcctgcgcaacccc
gccgccatcgccggcatggtcatgctggtgttgatgctggcggtggccatcgccgggccc
tggctctatccggccgatccgttcgagatcaagaccgcgccgctcacgccgcccttcagc
gaagacgcgtggctgggcagcgactacctcgggcgcgacgtgctcaccgcgctcatctac
ggcgggcgcgccacgctgctggtgggcgcggtggccgcgctgctgtcggtggtgatcggc
atcacgctcggcgccttcgcgggctactacggcggcaaggtcgatgcggcgctgatgaag
ctcaccgagttcttccaggtgctgcccgcgttgctgttcgcgatggtggtggtcacgctc
ttctcgcccacgctggtgacggtgacgctggccatcggcatcgtgagctggaccggcacc
gcgcgcctcacgcgcgccgagttcatgaagtaccgcgggctggagttcgtgcgcgccgag
cgggccattggcgcgcgcgacgcacgcatcatctggaaggtgattctgccgaatgcattg
ccgccgctggtggtgtcggccacgctggccatcggcgcggccatcctgttcgaagcgggc
ctgtcgttcctcggcctgggcgacccgaaccagatgagctggggtctcatgatcggctcg
agccggcagtacgtgctctcgtgctggtgggcagtggcctttccgggcgcggcaattttc
atcaccgtgctggccgtcagcctcatcggcgacgggctgaacgatgccctcaaccccaag
ctgagggaacgctga
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