Variovorax paradoxus EPS: Varpa_4440
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Entry
Varpa_4440 CDS
T01392
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_4440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4440
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_4440
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GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_25
AAA_16
Mg_chelatase
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
ADU38608
UniProt:
E6VB78
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Position
4816432..4817496
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AA seq
354 aa
AA seq
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MASGNDNNNDDALLRVQDLHVEFKTRRGQALVLNGVDFEIRAGETLCVVGESGCGKSMTA
LALLRLIPSPPGRIRDGRVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVG
DQIGESLQLHAGMNAREARQRAIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALA
CRPDILIADEPTTALDVTVQAQIFDLLRELQREKGTAIMFITHDMGAVAEMADRVMVMYA
GRVIEQGTTEQVLSEPGHPYTRGLIDCLPELGSSAAREGDVREDLAEIAGVVPSIWELGT
GCAFRERCPRAMERCAAEVPPMFAVTGEVAAGTPHGAACWLHAEALAEREREAA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggtaacgacaacaacaacgacgacgcattgctccgcgtgcaggacctgcac
gtcgagttcaagacccggcgcggccaggcgctggtgctcaacggggtcgacttcgagatc
cgcgccggcgaaacgctgtgcgtggtcggcgagtcgggctgcggcaagagcatgacggca
ctggcgctgctgcggctcattccctcgccgccagggcgcattcgcgacggccgcgtgctg
ttccagggcgaagacctggtgcaggcaagcgacgcgcgcatgcgcgaggtgcgcggcaac
cgcatctcgatgatcttccaggagccgatgacctctctgaacccggtgttcacggtgggc
gaccagatcggcgaatcgctgcagctgcatgccggcatgaacgcgcgcgaggcgcgccag
cgcgccatcgagatgctgcgccaggtgggcattccggcacccgagcggcgcgtggacgag
tacccgcaccagctctccggcggcatgcgccagcgcgtgatgatcgccatggcgctggcc
tgccggcccgacatcctcattgccgacgagcccaccaccgcgctggacgtgacggtgcag
gcgcagatcttcgacctgctgcgcgagctgcagcgcgagaagggcacggccatcatgttc
atcacgcacgacatgggcgcggtcgccgagatggccgaccgcgtgatggtgatgtacgcc
ggccgcgtcatcgaacagggcaccaccgaacaggtgctgtccgagcccggccacccctac
acgcgcggcctcatcgactgcctgcccgagctcggcagcagcgcggcccgggaaggcgac
gtgcgcgaagacctcgccgagatcgcgggcgtggtgccctcgatctgggaactgggcacg
ggatgcgcctttcgcgagcgctgcccgcgcgccatggagcgctgcgcggccgaggtgccg
ccgatgttcgcggtgactggcgaagtggcggccggcacgccgcatggcgctgcctgctgg
ctgcatgccgaggcgctcgcagagcgcgaaagggaggccgcatga
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