Variovorax paradoxus EPS: Varpa_4510
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Entry
Varpa_4510 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_4510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4510
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Varpa_4510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_27
AAA_15
MukB
AAA_30
AAA_22
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADU38677
UniProt:
E6UV83
LinkDB
All DBs
Position
complement(4889506..4891020)
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AA seq
504 aa
AA seq
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MTTPRLQLAHITKRYPAVVANSDISLAVAPGEIHAVLGENGAGKSTLMKIIYGSVKPDEG
TVTFDGQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLGLDKSLQLAEVARSITA
KASEYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVVKLFTVL
NKLASEGCSILYISHKLHEIRELCTACTVLRGGKVTGVCNPQNESNESLSRLMIGSEPPP
LQHRPVHAGAVALRVKGLTLAREDQFGVDLDGISFEVRAGEVVGIAGVSGNGQKELLYTL
SGEDVRADASMVQVFDKPAGRLRPRARRALGLHFVPEERLGRGAVPTLGLAHNLLLTRSN
AVGKGGWIRTAALEKHAKGIIERFNVKAGGPNAAARSLSGGNLQKFIVGREIDANPKLFI
VSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFDISDRLHVIAKGRLSPSID
RAAATLPQIGEWMSGLWNKEAAHA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccccccgactccagctcgcgcacatcaccaagcggtatcccgcggtggtggcc
aacagcgacatctcgctggccgttgcccccggcgaaatccatgccgttctcggcgagaac
ggcgcgggcaaatcgacgctgatgaagatcatctacggctcggtcaagcccgacgaaggc
accgtcaccttcgacggccaggccgtcaacctgcgcaacccgcagcaggcgagggcgctg
ggcatcagcatggtgttccagcacttcagcctgttcgacacgctcaccgtggccgagaac
gtgtggctgggcctcgacaaatcgctgcagttggccgaagtggcccgcagcatcaccgcc
aaggcgagcgaatacggcctcgacatcgatccctcgcgccccgtgcacacgctctcggtg
ggcgagatgcagcgggtcgaaatcatccgcgcgctgctcaccaaccccaagctcctgatc
ctggacgagccgacctcggtgctcacgccgcaggcggtcgtcaagctcttcacggtgctc
aacaagctggcctccgagggctgcagcatcctctacatcagccacaagctgcatgagatc
cgggagctgtgcaccgcctgcacggtgctgcgcggcggcaaggtgaccggcgtgtgcaat
ccgcagaacgagagcaacgaatcgctctcacggctgatgatcggcagcgagcctccgccc
ttgcagcaccgcccggtgcatgcgggcgccgtggcgctgcgcgtgaaggggctcacgctg
gcgcgcgaagaccagttcggcgtcgacctcgatggcatctcgttcgaggtgcgagccggc
gaagtggtcggcattgcgggtgtctccggcaacggccagaaggaactgctctacacgctc
tcgggcgaagacgtacgcgccgacgcctcgatggtccaggtgttcgacaagcccgccggc
cgtctcaggccgcgcgcacgccgcgcactgggcctgcacttcgtgcccgaggagcgcctc
ggccgcggcgccgtgccgacgctggggctcgcgcacaacctgctgctcacgcgcagcaat
gcggtgggcaagggtggatggattcgcaccgccgcactcgaaaagcacgccaagggaatc
atcgagcgcttcaacgtcaaggcgggcggcccgaatgcggcggcgcgttcgctctcgggc
ggcaacctgcagaagttcatcgtcggccgcgagatcgacgccaaccccaagctcttcatc
gtctcgcagcccacctggggcgtggacgtaggcgcggccgcgctgatccgcggcgagatc
ctcgcgctgcgcgatgccggctgcgcggtgctggtggtgagcgaagagctcgacgagctg
ttcgacatcagcgaccgcctgcacgtcatcgccaagggtcggctctctccgtccatcgac
cgcgctgcggccacgctgccgcagatcggcgaatggatgagcggactctggaacaaggaa
gcggcccatgcttaa
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