Variovorax paradoxus EPS: Varpa_4519
Help
Entry
Varpa_4519 CDS
T01392
Name
(GenBank) amino acid adenylation domain protein
KO
K04780
glyine---[glycyl-carrier protein] ligase [EC:
6.2.1.66
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
Varpa_4519
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
vpe01008
]
Varpa_4519
Enzymes [BR:
vpe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.66 glyine---[glycyl-carrier protein] ligase
Varpa_4519
Polyketide biosynthesis proteins [BR:
vpe01008
]
Nonribosomal peptide synthetase (NRPS)
Iterative NRPS
Bacillibactin synthetase
Varpa_4519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
NAD_binding_4
AMP-binding_C
PP-binding
Epimerase
3Beta_HSD
RmlD_sub_bind
GDP_Man_Dehyd
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ADU38686
UniProt:
E6UV92
LinkDB
All DBs
Position
complement(4901776..4909251)
Genome browser
AA seq
2491 aa
AA seq
DB search
MSTVDQLGRTAPLTSGQMAMWLGAKFASPDTNFNLAEAIDIAGEIDPDIFLAAMRQVADE
VEATRLGFVDTPQGPRQVVAPVFAGEIPYLDLSGDSDPLAEAERWMRADYTRNIDLAHGQ
LWLSALIRLAPDRHIWYHRSHHIVLDGFSGGLIARRFADTYTAMADDNAAVPEDSRLAPI
SQLADEEHAYRESGRFPRDRQYWTERFADAPDPLSLASRRSVNIGGLLRQTVHLPAASVQ
ALQTIAQELGTTLPQILIATTAAYLYRATGIEDMAIGIPVTARHNDRMRRVPAMVANALP
LRLAMRADLPIPELIREVGRQMRQILRHQSYRYEHLRSDLNMLVNNRQLFTTVVNVEPFD
YDFRFAGHPAKPRNLSNGTAEDLGIFLYERGNGQDLQIDFDANPAVHTAEDLADHQRRLL
AFIDAVIRLPLQAVGQIDLLGADERKQLLVTWNDTAHTVPDMHLTALIEAQLAANPQAIA
LRFDGEAMPNEELNRRANRLAHLLRARGAGPERTVALAIPRSMDLMVALLATLKTGAAYL
PVDPDFPQDRIAFMLGDAQPVCLVTTESLAESLPAAATTLLIDVAQTIADLESCADTNPG
VAIDPSHPAYVIYTSGSTGMPKGAVVSHRAIVNRLCWMQDRYGLQAADRVLQKTPSSFDV
SVWEFFWPLIDGATLVLAKPGGHKDAAYLAGLIAEEGITTIHFVPSMLEVFLLEPTAAEC
TTLRRVICSGEALSPALQSQFQQRLSCELHNLYGPTEAAVDVTSWECERTDDAEATSVPI
GRPIWNTQMHVLDSGMQPVPAGVTGELFIAGVGLARGYLKRPLLSAERFIANPYGAPGSR
MYRTGDLARWRKDGSLDFLGRADQQVKIRGLRIEPGEIESVLLQHPQVAQAAVVAREDVP
GEKRLVAYFVAADATDPQAAELRTHLAQSLPEYMVPSAFVSLPSLPLGPSGKLDRKALPP
PEVQAATPYAAPRTPTEKILAGLWAETLHLPRVGVNDNFFELGGHSLMIVQLMSMIRQQF
MIDLPVDTLFQVSTIAGLADLLDQESVTRPSLTPMPRPARIPLSFAQRRLWLMNQLEGAN
PAYNMPLALRLSGVLDRAALHAALGDLVQRHESLRTVYPNEDGLPYQHILDGADARPAVI
EADSSEEEIAAQLHAAAGHAFDLGSAAPLCVYLFKLVADEHVLLLLTHHIAGDGASLLPL
ARDLSVAYAARCEGKAPGWEPLPLQYADYALWQQELLGSEDDADSMAGRQREFWRSSLSD
LPEQLALPVDHARPLIPTYRGDVVPLQIPAHVHERILQLARDGQASVFMVLQAALAGLLS
RLGAGDDIVIGSPVAGRSDHALDELIGCFVNTLVLRTDTSGQPGLRELVSRVRATNLTAY
ANQEFPYDRLVELLRPGRSRANLPLFQVMLGFQNTSRLSFSLPGLSITPQPVAIDTAKFD
LSFILGEQRGADGLPGGISGGIQYSTDLFERSTVEAMGARLVRLLEEACDAPDDAVSGLA
ILSVEETDRLLSDWSGRTRDLAPLSFAAMVASHAAERPHADAVVLDDATISYAELDARAN
RLSHLLRAQGIAAGAIVATVLPRSLDLFVAHLAIVKAGAAYLPIDPNHMAARSAFVFEEA
TPAAVLTHDALLPELAGVPRCIALDSDSMVAALAIQSDKPLAQTANPQDAAYLIYTSGST
GVPKGVVVPHAGLASLGTAMAERLVIGHDSRVLQFSSSGFDASVMDQLMAFRAGAALVVP
GPEQLLGTELAELLEKQAVSHALIPPAALATLPHGEFPHLRTLVVGGDACPAALAAKWSE
GRRMINAYGPTEITICASMSAPMTAEELPSIGQPIWNTRMYVLDNALQPVPSGVAGELYI
AGSGVARGYLNRPALSAERFIADPHGAPGSRMYRSGDLARWRADGTLDFLGRADQQVKIR
GFRIEPGEIESVLLKHPLVTQAAVIAREDVPGEKRLVAYFVAGSEPQPTELRAHMAQALP
DYMVPSAFVHLPSLPLTQSGKLDKKALPVPDQQPVALYVEPRTPTEKLLAGLWSETLRLE
RVGIHDNFFEIGGHSLMAIQLGMRIRQQVRADFPHAEVYNRPTIADLAAWLDNEGGVAEA
LDLSRELDLPAHIRPQATAPKLAPRRVFLTGASGFVGSHLLAALLRDTAACVVCHVRAPD
EQAGEARLKRTLAQRQLGAIWDDARIKVVTGDLGKPRLGLDDAAVQLVREGCDAIYHCAA
QVDFLHPYASLKPANVDSVVTLLEWTSQGRAKSMHYVSTLAVIDQNNKEDTITEQSALAS
WSGLVDGYSQSKWVGDALARGAQARGMPVAIYRLGAVTGDHTHAICNADDLIWRVAHLYA
DLEAIPDMDLPLNLTPVDDVARAILGLAAQEASWGQVFHLMSQAALRVRDIPHVFERMGM
RLEPVGLEPWLQRAHERLAVAQDRDLAAVLAILDRYDTTATPPQVSGAATHAQLEAIGAP
IRPVDRDLLQRYFVDLGIDTKARRALETTTS
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgtcgatcagctgggccgcaccgccccccttacctcggggcagatggcgatg
tggctcggcgcaaagttcgcctcgcccgacaccaatttcaatctcgccgaagccatcgac
atcgctggcgagatcgaccccgacatctttctcgccgccatgcggcaggtggccgacgaa
gtcgaggccacgcgccttggtttcgtcgataccccgcaggggccgcggcaggtggtcgca
cctgtttttgctggcgagattccgtacctcgacctcagcggcgacagcgatccgctggcc
gaggcagagcgctggatgcgcgccgactacacccggaacatcgacctcgcgcacggacaa
ctgtggctctccgcattaatccgtctcgcgcccgatcgacacatctggtaccaccgcagc
caccacatcgtgctcgacggcttcagcggcggcctcattgcacgccgcttcgccgacacc
tacaccgcgatggccgacgacaacgcagcggtgcccgaagactcgcgtctcgcaccgatc
tctcagctcgctgacgaagaacacgcctaccgcgagtccggccgctttccgcgcgaccgc
cagtactggaccgagcgcttcgccgacgcgcccgatccgctgagcctcgcctcgcgccgc
tcggtcaacatcggtggcctcttgcgccagacggtgcacctgcccgcggccagcgtgcag
gcgctgcagaccatcgcgcaggagctcggcaccacgctgccgcagatactgatcgccacc
accgcggcctacctgtatcgcgcgaccggcatcgaggacatggccatcggcattcccgtc
accgcacgccacaacgaccgcatgcgccgcgtgcccgcgatggtggccaacgcgctgccg
ctgcgcctcgcgatgcgcgcggacctgccgattccggaactgatccgcgaagtcggccgg
cagatgcggcagatcctgcggcaccagtcgtaccgctacgagcacctgcgcagcgacctc
aacatgctggtgaacaaccggcagctcttcaccaccgtggtcaacgtcgagcccttcgac
tacgacttccgtttcgcgggccacccagccaaaccgcgcaacctctcgaacggcacggcg
gaagacctcggcatcttcctgtacgaacgaggcaacgggcaggacctgcagatcgatttc
gacgccaaccccgcggtgcacaccgcagaggacctggccgaccaccagcgccgcttgttg
gcgttcatcgacgccgtgatccgtctgccgttgcaggctgtcggacagatcgatctgctc
ggcgccgacgagcgcaagcagttgctggttacatggaacgacacggcccataccgtgccc
gacatgcacctcaccgcgctcatcgaagcgcaactcgccgccaatccgcaagccatcgcg
ttgcgcttcgacggtgaggcgatgcccaacgaagaactgaaccgccgcgccaaccgtctc
gcgcacctgctgcgcgcacgcggcgcgggcccggagcgcaccgtggcactcgcgattccg
cgttcgatggacctgatggtcgctttgctcgccacgctgaagaccggcgcggcgtacttg
ccggtcgatccggacttcccgcaagaccgcatcgccttcatgctcggcgatgcgcagccc
gtgtgcctcgtcacgaccgaatccctcgcggagtcgctgccggcagccgccaccacattg
ctgatcgatgtagcgcaaacgattgcggatttggagagttgcgccgacaccaaccccggc
gtcgcgatcgacccctcgcacccggcctacgtgatctacacctcgggctctaccggcatg
cccaagggcgcagtcgtgtcgcaccgcgcgatcgtcaaccgcctctgctggatgcaggac
cgctacggcctgcaggccgccgaccgcgtgctgcagaagacgccttccagcttcgacgtg
tcggtgtgggagttcttctggccgctgatcgacggcgccacgctggtgctcgcgaagccg
ggcggccacaaggatgcggcgtacctcgctgggctgatcgcggaagagggcatcacgacg
attcacttcgtgccgtcgatgctcgaggtcttcctgctcgaacccacggctgccgagtgc
accacactgcgccgtgtgatctgcagcggcgaggcgctgtcgcccgcgctgcaatcgcag
ttccagcagcgcctttcgtgcgagctgcacaacctctacggtccgaccgaggccgcggtc
gacgtcacttcgtgggaatgcgaacgcacggacgatgcggaggccacgagcgtccccatc
ggccgcccgatctggaacacgcagatgcacgtgctcgacagcggcatgcagcccgtgccg
gcgggcgtgaccggcgagctgttcatcgcaggcgtcggcctcgcccgcggctacctcaag
cgcccgttgctcagtgccgagcgcttcatcgccaatccttacggcgcgcccggcagccgc
atgtaccgcaccggcgaccttgcgcgctggcgcaaggacggcagcctcgacttcctcggc
cgcgctgatcagcaagtgaagatccgcggattgcgcatcgagccgggcgagatcgaatcg
gtgttgttgcagcacccgcaggtcgcgcaggccgcggtggtggcgcgcgaagacgtgcca
ggcgagaagcgcctggtcgcctacttcgtggccgccgatgccaccgatccgcaagcggcc
gagctgcgcacgcacctcgcgcaatcgctgcccgagtacatggttccgtcggccttcgtc
agcctcccgtcgctgccgctcggcccgagcggcaagctcgaccgcaaggcgctgccgccg
ccggaggtgcaggccgccactccctacgccgcgccgcgcacgccgaccgaaaagatcctc
gccggcctctgggccgaaacgctgcatctgccgcgcgtcggcgtgaatgacaacttcttc
gaactcggcgggcactcgctgatgatcgtgcagctgatgtcgatgatccgccagcaattc
atgatcgacctgccggtcgacacgctgttccaggtctccaccatcgcgggcctcgccgac
ctgctcgaccaggaatcggtcacacgtccgagcctcacgccgatgccgcgccccgcgcgc
attccgctctcgttcgcacagcgccgcctgtggctgatgaaccagctcgaaggcgcgaac
ccggcgtacaacatgccgctcgcgctgcgcttgtccggtgtgctcgaccgcgccgcgctg
catgcggcgctcggcgacctggtgcagcgccatgaaagcctgcgcacggtctacccgaac
gaagacgggctgccgtaccagcacatcctcgacggcgccgatgcgcgcccggcggtgatc
gaagccgacagcagcgaagaagaaatcgccgcgcagcttcacgccgcggcgggccatgcc
ttcgacctcggcagcgcggcgccgctgtgcgtctacctgttcaagctcgtggccgacgag
cacgtgctgctgctgctcacgcaccacatcgccggcgacggcgcgtcgctgctgccgctg
gcgcgcgacctgagcgtggcctatgccgcgcgctgcgaaggcaaggcgccgggctgggag
ccgctgccgctgcaatacgccgactacgcgctgtggcagcaggagctgctgggcagcgaa
gacgacgccgacagcatggccggccgccagcgcgagttttggcgttcttcgttgagcgac
ctgcccgagcaattggctttgcccgtcgaccacgcacgcccgctcattcccacctaccgc
ggcgacgtggtcccgctgcagattccggcgcacgtacacgaacgcatcctgcaactggca
cgcgacggacaggccagcgtcttcatggtgctgcaggccgcgctcgcgggcctcttgagc
cggctcggcgcgggcgacgacatcgtcatcggcagcccggtcgcagggcgcagcgaccat
gcactggacgagctcatcggctgcttcgtcaacacgctggtgttgcgcaccgacacctcg
ggccagccgggcctgcgcgagctggtctcgcgcgtgcgcgccaccaacctcacggcctac
gcgaaccaggagttcccatacgaccgcctcgtcgagctgctgcgccccggccgctcgcgc
gccaacctgccgctgtttcaggtcatgctcggcttccagaacaccagccgcctgtcgttc
agcctgccgggcctctcgatcacgccgcagccggtggccatcgacaccgcgaagttcgac
ctgtcgttcatcctcggcgagcagcgcggcgccgatggcctgccgggaggcatctccggc
ggcatccagtacagcaccgacctgttcgagcgcagcaccgtcgaagccatgggcgcgcgg
ctggtgcgtttgctcgaagaggcctgcgatgcgcccgacgacgcggtgagcggcctcgcc
atcctgagcgtcgaagaaaccgaccgcctgctctccgactggagcggccgcacgcgcgat
ctcgcaccgctctcgttcgccgccatggtggcgtcgcacgccgccgagcgcccgcatgcc
gatgcggtggtgctcgacgacgcgaccatcagctacgccgaactcgacgcgcgcgccaac
cggctctcgcacctgctgcgcgcgcaaggcatcgcggccggcgccatcgtcgcgacggtg
ctgccgcgttcgctcgatctcttcgtggcgcacctggccatcgtgaaggccggcgccgcc
tacctgcccatcgaccccaaccacatggccgcgcgcagcgccttcgtgttcgaggaagcc
acacccgccgcggtgctgacccacgatgcgttgctgcccgaactggccggtgttccccgc
tgcatcgccctcgacagcgacagcatggtcgctgcgctcgccatccagtcggacaaaccg
ctcgcgcaaacggccaatccccaggatgccgcctacctcatctacacctccggctccacc
ggcgtgcccaagggcgtggtcgtgccgcatgcgggcctcgccagcctcggcaccgcgatg
gctgagcggctcgtcatcggccacgactcgcgcgtgctgcagttctcctccagcggtttc
gacgcctccgtgatggaccagctgatggccttccgcgccggcgccgcgctggtggtgccg
gggccggagcaactgctcggcacggaactcgccgagctgctcgagaagcaggccgtgagc
cacgcgctgattccgcccgccgcgctcgcgaccttgccgcacggcgagttcccgcacctg
cggacgctggtggtcggcggcgatgcctgccccgccgcgctggccgcgaagtggtcagag
ggccgccgcatgatcaacgcctacggcccgaccgagatcaccatctgcgcgagcatgagt
gcgccgatgacagccgaggaactcccctccatcggccagccgatctggaacacgcggatg
tacgtgctcgacaacgcgctgcagccggtgccgtcgggtgtcgcgggcgagctctacatt
gccggcagcggcgtggcgcgcggttatctcaaccgtcctgcgttgagtgcggaacgcttc
atcgccgacccgcacggcgcgcccggcagccgcatgtaccgcagcggcgaccttgcacgc
tggcgcgccgacggcacgctcgatttcctcggccgcgccgaccagcaggtgaagatccgc
ggcttccgcatcgagccgggcgagatcgaatcggtgctgctcaagcacccgctggtcacg
caggccgccgtgatcgcccgcgaagacgtgcccggcgaaaagcgcctcgtcgcctacttc
gtcgcaggttccgaaccgcagccgaccgagttgcgcgcccacatggcgcaggccctgccc
gactacatggtgccctcggccttcgtgcacctgccgtcgctgccgctcacgcaaagcggc
aagctcgacaagaaggcgctgccggtgcccgaccaacagcccgtcgcactgtatgtggag
ccccgcacaccgaccgagaagctgctcgccggcctgtggtccgagacgctgcgcctggag
cgcgtcggcatccacgacaacttcttcgagatcggcgggcattcgctcatggccatccag
ctgggcatgcgcatccgtcagcaggtgcgcgcggacttcccgcacgccgaggtctacaac
cgcccgacgatcgccgacctggcggcgtggctcgacaacgaaggcggcgtggccgaggcg
ctggacctgtcgcgcgaactcgatttgcccgcgcacatccgcccgcaggccaccgcaccg
aagctcgcgccacgccgggtgttcctcaccggcgcgagcggcttcgtcggcagccacctg
ctggctgcattgctgcgcgacaccgcggcctgcgtggtctgccacgtgcgcgcccccgac
gagcaagccggcgaagcgcgcctgaagcgcacgttggcccagcgccagctcggcgcgatc
tgggacgacgcgcgcatcaaggtcgtgaccggcgacctcggcaagccgcgcctgggcctg
gacgacgcggccgtgcaactggtgcgcgaaggctgcgacgccatctaccactgtgccgcg
caggtcgactttttgcatccctatgcgagcctcaagcccgcgaatgtcgacagcgtggtc
acgctgctcgaatggacgtcgcaaggccgcgcgaagagcatgcactacgtctccacgctc
gcggtgatcgaccagaacaacaaggaagacaccatcaccgagcaatcggcgctggcttcg
tggagcgggctggtcgatggctacagccagagcaagtgggtcggcgatgcgctggcccgc
ggggcgcaggcgcgcggcatgccggtcgcaatctaccggctcggggccgtcaccggcgac
catacgcacgcgatctgcaatgccgacgacctgatctggcgcgtggcgcatctctatgcc
gacctggaagcgattcccgacatggacctgccgctgaacctcacgccggtggacgacgtg
gcgcgcgccatcctcggcctcgcggcgcaggaggcctcgtggggccaggtgttccacctg
atgagccaggcggcgctgcgggtgcgcgacattccgcacgtcttcgagcgcatgggcatg
cggctggagccggtcggactcgaaccttggctgcagcgcgcacatgaacggctggcagtg
gcgcaagaccgcgacctggccgccgtgctcgccatcctcgaccgctacgacaccacggcc
acgccgccgcaggtgagcggtgcggccacgcatgcgcagctcgaggccatcggcgcgccg
atccgcccggtggaccgcgacctgctgcagcgctacttcgtcgatctgggcatcgacacc
aaggcgcgtcgcgctttggaaaccaccacttcatag
DBGET
integrated database retrieval system
