Variovorax paradoxus EPS: Varpa_4525
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Entry
Varpa_4525 CDS
T01392
Name
(GenBank) Extracellular solute-binding protein, family 7
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_4525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4525
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_4525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF3606
DUF5792
Motif
Other DBs
NCBI-ProteinID:
ADU38692
UniProt:
E6UV98
LinkDB
All DBs
Position
4916454..4917656
Genome browser
AA seq
400 aa
AA seq
DB search
MASINVEDHRRRTPRKSRAGKPPFTRSTPLPRLTGLDDFKQTIKKETMKTTDRHSHRRSA
RPSPAALLAACAALVLGTPAVHAQDKPVQLKLSSWVPAQHPLNPALQAWADDIKKASNGS
ITAILFPSEQLGKAFDHYDMARDGIADFSYVNPGYQPGRFPVMAGASLPFLFANGKEGSA
AIDDWYRNYAAKEMKDVKYCFAFVHDPGTFHSRKKITLPTDIKGMKVRPATSTVGQLITS
LGGTNVQASAPESRDMLERGVADAITFPWGSIGLFGIDKVVKYHMDAPLYVTPFVWVMNK
GKYDAMSAGQKKVIDDHCTSEWAQKVAGPWADFEFGGRAKIAAQSGHEVYKLTPEQLDAW
RKAAAPSEAQWAESVKKVGEDPKAVMDALKGSLTKYKSAL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatcaacgtcgaagaccaccgccgccgcacccccaggaaatcccgcgcggga
aagcctccatttacccggtccacgccgctgcctaggctgaccggtctcgacgatttcaaa
cagaccataaagaaggagaccatgaaaaccaccgaccgccattcccatcgccgcagcgcg
cgcccctcgcccgccgccctgctcgcagcctgcgccgcgctcgtgctcggcacgcccgcc
gtgcatgcgcaggacaaacccgtgcagctcaagctctcgagctgggtgcccgcgcaacac
ccgctcaaccctgccctgcaggcctgggccgacgacatcaagaaggcatcgaacggcagc
atcaccgcgatcctgtttccgtcggagcagctcggcaaggccttcgatcactacgacatg
gcgcgcgacggcatcgcggacttctcgtacgtgaacccgggctaccagccgggccgtttc
ccggtgatggccggcgcatcgttgcctttcctcttcgccaatggcaaggaaggctcggcc
gccatcgacgattggtaccgcaactacgcggccaaggaaatgaaggacgtgaagtactgc
ttcgcgttcgtgcacgaccccggcaccttccactcgcgcaagaagatcacgctgcccacc
gacatcaagggcatgaaggtgcgcccggccacgagcaccgtgggccagctcatcacctcg
ctgggcggcaccaacgtgcaggcctcggcgcccgagtcgcgcgacatgctggaacgcggc
gtggccgatgccatcaccttcccgtggggatcgatcggcctcttcggcatcgacaaggtc
gtgaagtaccacatggatgcgccgctctacgtcacgcccttcgtctgggtgatgaacaag
ggcaagtacgacgcgatgtccgccgggcagaagaaagtgatcgacgatcactgcaccagc
gaatgggcgcagaaggtggcggggccctgggccgacttcgagttcggcgggcgcgcgaag
atcgccgcgcaatcgggccacgaggtctacaagctcacgccggaacagctcgacgcatgg
cgcaaggcggccgcgccgtcggaggcgcaatgggccgagagcgtgaagaaggtgggcgaa
gacccgaaggcggtgatggatgcgctgaagggcagcctcacgaaatacaagtcggcgctc
tag
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