Variovorax paradoxus EPS: Varpa_4527
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Entry
Varpa_4527 CDS
T01392
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
C4-dicarboxylate transporter, DctM subunit
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_4527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4527
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_4527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ADU38694
UniProt:
E6UVA0
LinkDB
All DBs
Position
4918355..4919656
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AA seq
433 aa
AA seq
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MSPDAVAILGFVALFVLMLLRVPVGMAMGLVGVVGYSYLVGPGPALKLVGQTSMRTVTDY
TFGVIPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVAT
AATFSAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIGKLFMAG
IVPGILAMAMYVLTIAIIVKLRPDWLPGGEVKPWSERFKDLRNVWAPLVLFVFVIGGLYG
GFFTPTEAGGVGASGAFILGLVRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLT
ITQSPQKLTEFLTGLGIGRYGVLALIMVMYLVLGCLMDAMAMIILTVPIIFPVIVHLGFD
PIWFGVIIVMTVELGLIHPPVGMNVFVIKSVVKDVSFTTIFKGVLPFIVTDIVRLVILIA
FPVIALWLPTRMG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgatgcagttgccatcctgggctttgtcgccctcttcgtcttgatgctgttg
cgcgtgccggtgggcatggcgatgggccttgtcggcgttgtcggctacagctacctcgtg
ggtcccggccccgcgctgaagctcgtgggccagacctccatgcgcaccgtgaccgactac
accttcggcgtgatcccgatgttcatgctgatgggcgcgctggtgtcggtgtcgggtgtg
agccgcgaacttttcaaggccgccaactcgatgatcggccacctgcgcggcggcctcggc
gttgcgaccgttgtagcttgcggcgggttcgcggcgatctgcggctcgtcggtggccacg
gcggccacgttctcggcggtggcgtatccggagatgcggcgcttcaactatccgcagtcg
ttctccaccggcgtgattgcggcgggcggcacgctgggcgctatcctgccgccgtcgacg
gtgctcgcggtctacgccatcctcacgcagcaggacatcggcaagctcttcatggcgggc
atagtgccgggcattttggcgatggcgatgtacgtgctgacgatcgcgatcatcgtgaag
ctcaggcccgactggctgcccggcggcgaggtgaagccgtggtcggagcgcttcaaggac
ctgcgcaacgtgtgggcgccgctggtgttgttcgtgttcgtgatcggtgggctctacggc
ggcttcttcacgccgaccgaagcgggcggcgtgggcgcgagcggtgcgttcatcctcggg
ctcgtgcggcgcaagctcgatggcccgaagatccgcgaggcgctgctctctgccacgcgc
acggcggcggcggtgttcacggtgctgatcggcgcactgctgttcggctacttcctcacc
atcacgcaaagcccgcagaagctcaccgaattcctcaccggcctgggcatcggccgctac
ggcgtgctcgcactcatcatggtgatgtacctcgtgctcggctgcctgatggacgcgatg
gcgatgatcatcctcacggtgcccatcatctttccagtgatcgtgcacctggggttcgac
ccgatctggttcggcgtgatcatcgtgatgacggtggagctggggctcatccatccaccg
gtgggaatgaacgtcttcgtcatcaagagcgtggtgaaggacgtgagcttcaccaccatc
ttcaagggcgtgctgccgttcatcgtgacggacatcgtgcgcctggtgatcctgatcgcg
ttcccggtcatcgcgctgtggctgccgacgagaatgggctga
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