Variovorax paradoxus EPS: Varpa_4642
Help
Entry
Varpa_4642 CDS
T01392
Name
(GenBank) acriflavin resistance protein
KO
K07788
multidrug efflux pump
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_4642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4642
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_4642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ADU38805
UniProt:
E6UX88
LinkDB
All DBs
Position
complement(5056546..5059722)
Genome browser
AA seq
1058 aa
AA seq
DB search
MSISAGFIKRPIGTTLLALAILLVGAAVFPLLPVAPLPQVDFPTIQVSANLPGASPETMA
SNVAQPLERQFSLIAGLSQMTSTSGLGSTQITLQFDLDRNIDAAALDVQAAITASTGQLP
ANLPSPPSFRKVNPADSPILILSVQSKTLPLTEVNDYADNILAQQISQIAGVGLVNIGGA
QKPAVRVQLDPAKLAALGLSLEDVRTVLSSATVNAPKGTIDGPNQSFTVYTNDQLLKAQP
WNDVILAYRNGAPIRVRDLGVAIDGPENAKIAGWAYAGAAAPEGNTIQNGRSIVLAITKQ
PGANVIETVDRINAAMPRLKASIPPTVEVNALVDRTQTIRASVLDVEFTLLLTIALVVAV
IFVFLRNVPATLIPSVTVPLALLGTVAVMYLLGYSLDNLSLMALTIAVGFVVDDAIVMLE
NIYRYVEEGMSPLEAAYKGAGEIGFTIISISVSLIAVFIPLLLMGGIVGRLFREFAVTVT
LTIVVSVVISLTLTPMLCSRFLKNEHARKHGRLYLLFERGFDAMLNGYKRGLHVVLDHQF
ITLMVFIATVAATGFLFMVIPKGFFPQQDTGFISGFAESAQDASFASMNARMLELADVVR
KDPDVSAFGMNGSSSTFNTGNFYINLKPKDEGRTASADEIITRLRPQLAKVQGVNLFLQA
GQDIRVGGRSSRTQYQYTVTDSNLDELNTWAPKLLARFRQIPEITDLASDQQNAAASAVL
TIDRDRASSFGISPSVIDATLYDAIGQRQVAQYFTQLNSYHVVLEVTPELQKDPALFSKL
YLTSPLTGQQVPLSTFVKVDTSKTAYLSISHQGQFPAVTISFNLAPGHALGDAVNAINKA
QAEMGIPQSLSGAFQGTAQAFQDSLSSQPYLIAAALVAVYIVLGLLYESYIHPLTILSTL
PSAGVGALLILMAGGYDLSVIALIGIILLIGIVKKNGIMMIDFALKAEREQGMEPKEAIY
QACLLRFRPIMMTTMCALLSGLPLMLGHGSGSELRRPLGYAMVGGLILSQALTLFTTPVV
YLYLDRAHFWYLRRKEARKARKAAKGEGGETPPVAEAH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatttccgccggattcatcaagcgcccgatcggcaccacgctgctcgcgctggcc
atcctgctggtcggtgcggcggtgttcccgctgctgccggtggcgccgctgccgcaggtc
gactttccgacgattcaggtgtcggccaacctgccgggcgcgagcccggagacgatggcc
tccaacgtggcgcagccgctggagcggcagttctcgctcatcgcgggcctctcgcagatg
acctcgaccagcggcctcggctccacgcagatcacactgcagttcgacctggaccgcaac
atcgacgccgccgcgctcgacgtgcaggcggccatcaccgcttccaccggccagctgccg
gccaacctgccgagcccgccgagctttcgcaaggtgaaccctgcggattcgcccatcctc
atcctctcggtgcaatcgaagacgctgccgctcaccgaggtgaacgactacgccgacaac
atcctcgcgcagcagatctcgcagatcgcgggcgtgggcctggtcaacatcggtggcgcg
cagaagcccgcggtgcgcgtgcagctcgacccggccaagctcgccgcgctcggcctcagc
ctggaagacgtgcgcacggtgctctcgtcggccacggtgaacgcgcccaagggcaccatc
gacgggccgaaccagagcttcaccgtctacacgaatgaccagttgctgaaggcccagccg
tggaacgacgtgatcctggcctaccgcaacggcgcgccgatccgcgtgcgcgacctgggc
gtggccatcgacggccccgagaacgcgaagattgccggctgggcctacgcgggcgcggcg
gcacccgaaggcaacaccatccagaacggtcgctccatcgtgctcgccatcaccaagcag
ccgggcgcgaatgtgatcgagacggtggaccgcatcaacgccgccatgccgcgcctgaag
gcctcgattccgccgacggtggaagtcaacgcgctggtcgatcgcacgcagacgatccgc
gcctcggtgctcgacgtggagttcacgctgctcctgaccatcgcgctcgtggtggcggtg
atcttcgtgttcctgcgcaatgtgccagccacgctcatcccgagcgtgacagtgcccctc
gcactgctgggcacggtcgcggtgatgtacctgctgggctacagcctggacaacctctcg
ctcatggcgctcaccatcgcggtcggcttcgtggtggacgacgccatcgtgatgctggag
aacatctaccgctacgtggaagagggcatgtcgccgctggaagccgcgtacaagggcgcg
ggcgagatcggcttcacgatcatctcgatttccgtgtcgctgattgcggtgttcattcca
ctgctgctcatgggcggcatcgtggggcggctgttccgcgagttcgcggtgacggtcacg
ctgaccatcgtggtgtcggtggtcatctcgctgacgctcacgccgatgctgtgctcgcgc
ttcctgaagaacgagcatgcacgcaagcacggccggctctacttgttgttcgagcgcggc
ttcgacgcgatgctcaacggctacaagcgcggcctgcatgtggtgctcgaccaccagttc
atcacgctgatggtcttcatcgccacggtggcggcgacgggctttctgttcatggtcatc
cccaagggcttcttcccgcagcaggacacgggcttcatctcgggctttgccgagtcggcg
caggacgcttcgttcgcctcgatgaacgcacgcatgctggagctggccgatgtggtgcgc
aaggacccggacgtctcggccttcggcatgaacggcagttcgtcgaccttcaacaccggc
aacttctacatcaacctgaagcccaaggacgagggccgcaccgcgagcgccgacgagatc
atcacgcggttgcgtccgcaactggccaaggtgcagggcgtgaacctgttcctgcaggcg
gggcaggacatccgcgtgggcggccgctcgtcgcggacgcaataccagtacacggtgacc
gactcgaacctggacgagctcaacacctgggcgccgaagctgctcgcgcgcttccggcag
attccggagatcaccgacctggcctccgaccagcagaacgccgccgcctcggccgtgctg
accatcgaccgcgaccgcgcatcgagcttcggcatttcgccgagcgtcatcgatgcgacg
ctgtacgacgcgatcggccagcgccaggtggcgcagtacttcacgcagctcaacagctac
cacgtggtgctcgaagtcacgcccgaactgcagaaagacccggcgctcttcagcaagctg
tacctcacctcgccgctcacgggccagcaagtgccgctctcgaccttcgtgaaggtggac
acgagcaagaccgcatacctctcgatcagccaccagggccagttcccggcggtgacgatc
tcgttcaacctcgcgccgggccatgcgctgggcgatgcggtcaacgccatcaacaaggcg
caggccgagatgggcattccgcagtcgctgagcggcgcgttccagggcacggcgcaggcc
ttccaggattcgctctcgtcgcagccctacctcatcgccgcggcgctggtggcggtgtac
atcgtgctgggcctcctgtacgagagctacatccacccgctcacgattctctcgacgctg
ccatcggccggcgtgggcgcgctgctgatcctcatggcgggaggctacgacctcagcgtg
atcgcgctgatcggcatcatcctgctcatcggcatcgtgaagaagaacggaatcatgatg
atcgacttcgcgctcaaggccgagcgcgagcagggcatggaacccaaggaggcgatctac
caggcgtgcctgttgcgcttccgcccgatcatgatgaccacgatgtgcgcgttgctctcg
ggcctgccattgatgctgggccacggctcgggctcggagctgcgccggccgctgggctac
gcgatggtcggcgggctgatactctcgcaggcgctcaccttgttcaccacgccggtggtc
tacctgtacctggaccgcgcccacttctggtacctgcgccgcaaggaagcgcgcaaggcc
aggaaggcagcgaaaggagagggcggcgagactccaccggtggccgaggcgcattga
DBGET
integrated database retrieval system