Variovorax paradoxus EPS: Varpa_4691
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Entry
Varpa_4691 CDS
T01392
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_4691
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_4691
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_4691
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Varpa_4691
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Varpa_4691
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Varpa_4691
Prokaryotic type
Varpa_4691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Baculo_PEP_C
WXG100
DUF3450
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
ADU38854
UniProt:
E6UXD7
LinkDB
All DBs
Position
complement(5114458..5115789)
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AA seq
443 aa
AA seq
DB search
MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTVQTRTEEIQARRNALNKQ
IGPLKAKGESTDALMAEVNALKAEQESQSKRLDEIQPELQALLLAVPNLPHASVPVGEDE
TGNVEVRRWSPQGGAGANATPLGFAAKDHVDLGAPLGLDFEMGAKLAGSRFTVMKGPIAR
LHRALAQFMLDTQTEKHGYAECYVPYIVNAATLSGTGQLPKFEGDLFAAKKGGQDGEPAP
DHSALYLIPTSEVPLTNFVRDEVVAESQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQHQF
DKVEMVQIVHPEKSYDALEQMTGHAEAVLQALELPYRVVLLCTGDMGFGATKTYDLEVWL
PAQDTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRALVAVLENHQN
EDGSINVPVALRPYLGGLELLRG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcaccctgctccgaaaagacctggcctccgctgtggccggcctcgaaaaa
cgcaagaagaaccagccctacctcgatgtgtcggcgttcaccgcgctcgaagccgagcgc
aagaccgtccagacccgcactgaggaaatccaggcgcgccgcaacgccctgaacaagcag
atcggcccgctcaaggccaagggcgaatcgaccgatgcgctgatggccgaagtcaacgca
ctcaaggccgagcaggaatcgcagtccaagcgcctcgacgagatccagcccgaactgcag
gccttgctgctcgcggtgcccaacctgccgcacgccagcgtgccggtcggcgaggacgag
accggcaacgtcgaagtgcgccgctggagtccgcaaggcggtgccggcgccaatgccacg
ccgctgggcttcgccgcgaaggatcacgtggacctcggcgcaccgctgggcctcgacttc
gagatgggcgccaagctcgccggctcgcgcttcaccgtcatgaaggggccgatcgcccgc
ctgcaccgcgcgctcgcgcagttcatgctcgacacccagaccgagaagcacggctatgcc
gagtgctacgtgccctacatcgtcaacgccgccacgttgagcggcaccggccagttgccc
aagttcgaaggcgacctcttcgccgcgaagaagggcggccaggacggcgagcccgcgccc
gaccattcggcgctgtacctgatcccgaccagcgaagtgccgctgaccaacttcgtgcgc
gacgaggtggtggccgagtcgcaattgccgatcaagctcacggcgcacacgccgtgcttc
cgttcggaagccggcagcgcggggcgcgacacgcgcggcatgatccgccagcaccaattc
gacaaggtcgagatggtgcagatcgttcatcccgaaaagagctacgacgcgctggagcag
atgaccggccatgccgaggccgtgctgcaggcgctcgaactgccgtaccgcgtggtgctg
ctgtgcaccggcgacatgggcttcggcgcgaccaagacctacgacctggaggtctggctg
ccggcgcaggacacctaccgcgagatcagctcggtctcgaactgcgaagccttccaggcg
cgtcgcctgcaagctcgcttcaagaacgcacaaggcaagaacgaactcgtgcacacgctg
aacggctctggcctggcggtgggacgcgcgctggtggcggtgcttgaaaaccaccagaac
gaggatggttcgatcaacgtgcccgtcgcgctgcggccatacctcggcggactggaactg
ttgcgcggttga
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