Variovorax paradoxus EPS: Varpa_4792
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Entry
Varpa_4792 CDS
T01392
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_4792
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpe01007
]
Varpa_4792
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpe03016
]
Varpa_4792
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_4792
Enzymes [BR:
vpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Varpa_4792
Amino acid related enzymes [BR:
vpe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Varpa_4792
Transfer RNA biogenesis [BR:
vpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Varpa_4792
Prokaryotic type
Other AARSs
Varpa_4792
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Varpa_4792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ADU38953
UniProt:
E6UZR7
LinkDB
All DBs
Position
complement(5206480..5208288)
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AA seq
602 aa
AA seq
DB search
MAMRTHYCGLVTEALLGQTVTLCGWVNRRRDHGGVIFIDVRDREGYVQVVCDPDRASTFA
VAENLRNEFCVQITGLVRSRPEGTTNDSLKSGKIEVLCHELKVLNPSVTPPFLLDDDNLS
ETTRLTHRVLDLRRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYL
VPSRVHDGSFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQPEFTQIDIETS
FLAEEEIREMFEGMIRNVFRNAAGIDLPVFPTMTYGDAMFKYGSDKPDLRVKLEFTELTE
LMKRVEFKVFSNAATQKDGRVVALRVPGGGGEGGLSRGEIDAYQEFVKIYGAKGLAYIKV
NDAAAGREGLQSPIVKNLDDNTLAEIIARTGARNGDILFFGADKEKVVNDAIGALRVKIG
HSAFGKKSGLFDDRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAPEKC
IAKAYDMVLNGIEMGGGSVRIHREEVQSKVFRALKISAEDAQLKFGFLLDALQYGAPPHG
GIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNTPQA
AA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgtactcactattgcggtcttgtgaccgaagccctgttgggccagaccgtc
accctgtgcgggtgggtcaaccgtcgccgtgaccacggcggcgtgatcttcatcgacgtg
cgcgaccgcgaaggttacgtgcaggtggtgtgcgaccccgatcgcgcctccaccttcgcc
gtggccgagaacctgcgcaacgagttctgcgtgcagatcaccggcctcgtgcgttcgcgc
cccgaaggcacgaccaacgacagcctcaagagtggcaagatcgaagtgctgtgccatgag
ctgaaggtgctcaacccgtcggtcacgccgccgttcctgctggacgacgacaacctctcg
gaaaccacccgcctcacgcaccgcgtgctcgacctgcgccgtccggccatgcagcgcaac
atgatgctgcgctacaaggtgacgatggaaacgcgcaagttcctcgatgccaacggcttc
atcgacatcgagacgccgatgctgggcaagtccacgcccgaaggcgcgcgcgactacctc
gtgcccagccgtgtgcacgacggcagcttcttcgcgctgccgcagtcgccgcagctcttc
aagcagctcttgatggtggccggctacgaccgctactaccagatcgtgaagtgcttccgc
gacgaagacctgcgcgccgaccgccagcccgaattcacgcagatcgacatcgagacctcg
ttcctcgccgaagaggaaatccgcgagatgttcgaaggaatgatccgcaacgtgttccgc
aatgccgcgggcatcgacctgccggtgttcccgaccatgacgtacggcgatgcgatgttc
aagtacggctcggacaagcctgacctgcgcgtgaagctcgaattcaccgaactcaccgag
ctgatgaagcgggtcgagttcaaggtgttctcgaacgccgcgacgcaaaaggacggtcgc
gtggtcgcattgcgtgtgcctggcggcggcggcgagggcggcttgtcgcgcggtgaaatc
gacgcgtaccaagagttcgtcaagatctacggcgcaaagggcctcgcctacatcaaggtg
aacgacgcggctgccggccgcgaaggcctgcagagcccgatcgtgaagaacctggacgac
aacacgctggccgagatcatcgcccgcacgggtgcgcgcaacggcgacatcctgttcttc
ggcgccgacaaggaaaaggtcgtcaacgacgccatcggcgcgctgcgcgtgaagatcggc
cacagcgccttcggcaagaagagcggcctgttcgacgatcgctgggcgccgctctgggtg
gtcgatttcccgatgttcgagttcgacgaggaaggccagcgctggagcgccgtgcaccat
ccgttcaccgcaccgaaggacggccatgaagacctcatggacaccgcccccgagaagtgc
atcgccaaggcctacgacatggtgctcaacggcatcgagatgggcggcggctcggtgcgt
atccaccgcgaggaagtgcagagcaaggtgttccgtgcgctgaagatcagcgctgaggac
gcacagctcaagttcggcttcctgctcgacgcgctgcagtacggcgccccgccgcacggc
ggcatcgccatcggcctggaccgcctggtcatgctgatgaccggcgccgagtcgatccgc
gacgtgatcgccttccccaagacccagcgcgcgcaagacctgctgacgcaggcgccgagc
ccggtcgacgagaagcagctgcgcgaactgcacatcaagctgcggaacacgccgcaagcc
gcagcctga
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