KEGG   Variovorax paradoxus EPS: Varpa_4804
Entry
Varpa_4804        CDS       T01392                                 
Name
(GenBank) D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00260  Glycine, serine and threonine metabolism
vpe00270  Cysteine and methionine metabolism
vpe00680  Methane metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
vpe01120  Microbial metabolism in diverse environments
vpe01200  Carbon metabolism
vpe01230  Biosynthesis of amino acids
Module
vpe_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    Varpa_4804
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Varpa_4804
   00270 Cysteine and methionine metabolism
    Varpa_4804
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpe04147]
    Varpa_4804
Enzymes [BR:vpe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     Varpa_4804
    1.1.1.399  2-oxoglutarate reductase
     Varpa_4804
Exosome [BR:vpe04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Varpa_4804
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh ACT_AHAS_ss ACT NAD_binding_2 PilM_2 AlaDh_PNT_C ACT_4 Rossmann-like
Other DBs
NCBI-ProteinID: ADU38965
UniProt: E6UZS9
LinkDB
Position
complement(5220766..5221998)
AA seq 410 aa
MSSKTSLDKSRIKFLLLEGIHPSAVEVLRAAGYTNIESLPGALPDAELKAKVADVHFLGI
RSRTQLTAEVFAAAHKLVAAGCFCIGTNQVDLEAAREHGVAVFNAPYSNTRSVAELVLAE
AILLLRGVPEKSAVAHRGGWLKSADNAFEIRGKTLGIVGYGSIGAQLSVLAEALGMHVAF
FDVVTKLPLGNARQVRDLHQLLGQSDIVTLHVPETQATQWMIGAAEIAAMKPGSILINAS
RGTVVEIDALAGALKEKKLLGAAIDVFPVEPRSNKDEFQSPLRGLDNVILTPHIGGSTME
AQANIGLEVAEKLVKYSDNGTSTSSVNFPEVALPAHPGKHRLLHVHKNVPGVLSEINKIF
SDNHINISSQFLQTNEKIGYVVMDIDAASSDLALEKLAKVGGTIRSRVLF
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgagcagcaaaacctccctcgacaaaagcaggatcaagttcctcttgctcgagggcatc
cacccctcggccgtggaggtgctgcgcgccgccggctacaccaacatcgagtcgctgccg
ggtgccttgcccgacgccgaactcaaggcgaaggtcgccgacgttcacttcctgggcatc
cgctcgcgcacgcaactgacggccgaagtgttcgccgccgcccacaagctggtggcggcc
gggtgcttctgcatcggcaccaaccaggtcgacctggaagccgcccgcgaacacggcgtg
gccgtgttcaacgccccctattcgaatacgcgttcggtggccgaactggtgctggccgaa
gcgatcctgctcctgcgcggcgtgcccgagaagagcgcggtggcgcaccgcggcggctgg
ctaaagtcggccgacaacgccttcgaaatccgcggcaaaacgctgggcatcgtggggtac
ggctccatcggcgcgcagctgtcggtgctggccgaggcgctgggcatgcatgtggcgttc
ttcgacgtggtcaccaagctgccgctgggcaatgcgcgtcaggtgcgcgacctgcaccag
ctgctgggccagagcgacatcgtcacgctgcacgtgcccgagacgcaggccacgcaatgg
atgatcggcgcggccgagatcgctgccatgaagccgggttcgatcctcatcaacgcctcg
cgcggcaccgtggtcgagatcgacgcgctggccggcgcgctgaaggaaaagaagctcctg
ggcgccgcgatcgacgtgttcccggttgagccgcgcagcaacaaggacgagttccagtcg
ccgctgcggggattggacaacgtgatcctcacgccgcacatcggcggctcgaccatggag
gcgcaggccaacatcgggctcgaagtggccgagaagctggtgaagtacagcgacaacggc
acctctacgtcctcggtcaacttccccgaggtggcgctgcccgcgcacccgggcaagcac
cggctgctgcacgtgcacaagaacgtgccgggcgtgctgtcggagatcaacaagatcttc
tcggacaaccacatcaacatctcctcgcagttcctgcagacgaacgagaagatcggctac
gtggtgatggacatcgacgcggcttcttccgacctggcgctggagaagctcgcgaaggtt
ggcgggacgatccgcagccgcgtgctgttctga

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