Variovorax paradoxus EPS: Varpa_4850
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Entry
Varpa_4850 CDS
T01392
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01733
threonine synthase [EC:
4.2.3.1
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00260
Glycine, serine and threonine metabolism
vpe00750
Vitamin B6 metabolism
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01230
Biosynthesis of amino acids
Module
vpe_M00018
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Varpa_4850
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Varpa_4850
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.1 threonine synthase
Varpa_4850
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
ADU39011
UniProt:
E6UZX5
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All DBs
Position
complement(5267882..5269138)
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AA seq
418 aa
AA seq
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MTPSPVLDFKFAALPADPSAHRSGNPAASALARTLKPVRNPRLRGLQCLRCDALYPVTLT
HDGCPACKRAGFHVALRASYLPDLGNQTERAEGHDAIPMPYASGFTLGEGQTPMLEMTEL
ARHFDVARLGLKDESSNPTGSHKDRMTAVGVAQALDFGAHTLVLASSGNAAVSAAHYAWA
AGLRCEVATYEGMPATYSRQLDALGARRYVFADNAGRWAFVRERSQYPGYFALTNYRLPA
LGSAPLAIEGYKTIAPECVADAGLPDHIVIPTARGDLAWGIYAGFRDLLAAGRIPRLPRL
WLVEPFPRLARVFAGGAINGSYPGHTAQFSTAGATVTYLQWQAASATGGGAVVVSDDEAR
AARRLLTAAGVSAELCAAGGLAALRQLRESGAIAADAHVVLMLTANASSDPSWPDPAV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccctcgccagttctggacttcaagttcgccgccttgccagcggacccctcggcc
catcgttcggggaatcccgccgcctccgccctggcccgcacgctcaagccggtgcgcaat
ccgcgcttgcggggcctgcagtgcctgcgctgcgatgcgctctacccggtcacgctgacg
cacgacggctgccccgcctgcaagcgcgcgggctttcacgtcgcattgcgcgcgagctac
ctgcccgacctggggaaccagacagagcgagcagaaggccacgatgcgatccccatgccc
tatgcgtcgggcttcaccctcggcgagggccagacgccgatgctggagatgacggagctt
gcgcggcatttcgacgtcgcgcggctcggcctcaaggacgaatcgagcaaccccaccggc
tcgcacaaggaccggatgacggcggtgggcgtggcgcaggcgctggacttcggcgcccac
acgctggtgctcgcatcgtcgggcaatgccgcggtgtcggcggcgcactacgcgtgggcg
gcgggcctgcgctgcgaggtcgcgacctacgaaggcatgccggcgacctattcgcgccag
ctcgatgcgctgggcgcgcggcgctatgtgttcgccgacaacgccggccgctgggccttc
gtgcgcgagcgctcgcagtaccccggctacttcgcgctgaccaactaccgtttgcctgcg
ctcggcagtgcgccgctggccatcgagggctacaagacgattgcgcccgagtgcgtggcc
gacgccggcctgccggaccacatcgtgattcccaccgcgcgcggcgacctcgcctggggc
atctacgcgggctttcgcgacctgctggccgcggggcgcattccgcgcctgccgcggctc
tggctggtggagccgtttccgcgcctcgcacgcgtgttcgcgggtggcgcgatcaacggc
agctatcccggccacaccgcgcagttctcgacggcgggcgccaccgtgacctacctgcag
tggcaggccgccagcgccacgggcggcggcgcggtggtggtgagcgacgacgaggcgcgt
gcggcgcggcggttgctcacggctgccggcgtgagcgccgaactgtgcgcggccggcggc
ctggccgcgctgcggcaactgcgcgagagcggtgccatcgccgccgacgcgcatgtggtg
ctgatgctcacggccaacgcgtcgagcgatccgagctggcccgatccggccgtctga
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