Variovorax paradoxus EPS: Varpa_4963
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Entry
Varpa_4963 CDS
T01392
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00230
Purine metabolism
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Varpa_4963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpe03009
]
Varpa_4963
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Varpa_4963
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Varpa_4963
Ribosome biogenesis [BR:
vpe03009
]
Prokaryotic type
Other maturation factors
Varpa_4963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
HD
RelA_AH_RIS
ACT
ThiS
ACT_AHAS_ss
UreF
DUF1087
Motif
Other DBs
NCBI-ProteinID:
ADU39123
UniProt:
E6V244
LinkDB
All DBs
Position
5387418..5389676
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AA seq
752 aa
AA seq
DB search
MSAVAKHQSHAPSGGTPKPSPAALNAAAASFAALTARLDYLGSEDTELVRRAYRFADEAH
LGQLRNSGEPYITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGVTKPELIERFGAPVA
ELVDGLTKLDKLQFNTREENQAESFRKMLLAMARDVRVILVKLADRTHNMRTLADAPREK
WARISRETLEIYAPIAHRLGLNQTYRELQELSFRHLKPWRYATLSKAVAKARGRRRDLIQ
KVQKEVETAFSAAGMTLRIAGREKTLYSIYRKMEDKHLSFAQVTDIYGFRLIVPNVIACY
TGLGILHQMYKPLPGKFKDHIAIAKLNGYQSLHTTLVGPAGVSVEFQLRTEAMHVVAESG
VAAHWLYKAAEPNGASNDRLGTKWLQSLLDIQDETRDAAEFWDHVKVDLFPDAVYVFTPK
SQIMALPRGATVVDFAYAIHSNIGDHTSAARINGDQVPLRTELKNGDVVEVITAPVSTPN
PAWLGFVRTGRARSKIRHYLKTLAHAESEGLGEKLLAQALRAEGLGKLPEDDDEHQALWE
KLLRFTGNRTRSELLTDIGLGKRIASIVAKRLMALLAELGERPDALLLSRERLIPHEAVS
QGAVTLDGSENSSVRFALCCRPIPGDQIVGYLGHGEGLVVHTEDCGVGQRLRHKDSERFF
AVEWADEPTRAFETGVVITVRNDKGVLARVAATLADAEADITHVEMADETPQDSTDLRFV
IAVRDRAHLDAVLRAARRTASVLTAARTVPAP
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggtcgccaaacatcagtcccatgccccatcggggggcacgccgaagccgagt
ccggcggcgctgaacgcggccgccgcaagcttcgccgcattgacagcgcgcctggactac
ctgggctccgaagacaccgagctggtacgccgcgcataccgcttcgccgacgaggcccat
ctgggccagttgcgcaacagcggcgagccgtacatcacccaccccatcgccgtggcggcg
caatgcgccgaatggaagctcgatgcccaggcgctgatggccgcactgctgcacgacgcc
atcgaagactgcggcgtcaccaagccagagctgatcgagcgcttcggcgccccggtcgcc
gaactggtcgacgggctcaccaagctcgacaagctgcagttcaatacgcgtgaagagaac
caggcagagtctttccgcaagatgttgctggccatggcgcgcgacgtgcgcgtcatcctc
gtcaagctggccgaccgcacgcacaacatgcgcacgctggccgacgcgccgcgtgaaaaa
tgggcccgcatctcgcgcgaaacgctcgagatctacgcacccatcgcgcaccgcctcggg
ctgaatcagacctaccgcgaactgcaggagttgtcgttccggcacctcaagccgtggcgt
tacgccacgctgtccaaggcggtggccaaggcgcgcgggcgacgacgtgacctgatccag
aaggtgcagaaagaagtcgagaccgctttctctgccgccggtatgacgctgcggatcgcc
ggacgcgagaaaacgctctattccatctaccgcaagatggaagataaacacctgagcttt
gcccaggtgaccgacatctacggcttccgcctgatcgtgccgaacgtcattgcctgctac
acgggcctcggcatccttcaccagatgtacaagccgctgcccggcaagttcaaggaccat
atcgcgatcgccaagctcaacggctatcagtcgctgcacaccacgctggtggggccggct
ggcgtgagcgtcgagttccagctgcgtaccgaagcgatgcacgtggttgccgaatccggc
gtcgcggcgcactggctctacaaggcggccgagccgaacggggcaagcaacgaccggctg
ggcaccaagtggctgcagtcgctgctcgacatccaggacgagacgcgcgacgccgccgag
ttctgggaccacgtcaaggtggacctcttccccgacgcggtttatgtcttcactccaaag
agccagatcatggcgctgccgcgtggcgccacggtggtcgacttcgcttacgccatccac
agcaacatcggtgaccacacctcggccgcgcgcatcaacggcgaccaggtgcctctgcgc
accgaactcaagaacggcgacgtggtcgaggtgatcacggcgcccgtgtcgacccccaat
cccgcctggctcggcttcgttcggaccggccgggcgcgctccaagatccgccattacctg
aagacgctggcacatgccgaatccgaaggcctcggcgaaaagctgctcgcacaggcgctg
cgcgccgaaggtctcggcaagctgcccgaggacgacgacgagcaccaggctttgtgggaa
aagctgctgcgtttcaccggcaaccgcacccgttctgaattgctgaccgacattggcctt
ggcaaacgcattgcaagcatcgtcgccaagcgactcatggcactgctggccgagttgggc
gaacgccccgatgccctgctgctgagccgagagcgcctcatcccgcacgaagccgtgtcg
cagggcgcggtcacgctcgatggcagcgaaaactcttcggtgcgctttgcgctgtgctgc
cgccccattccgggcgaccagatcgtcggttacctcgggcacggcgagggcttggtggtc
cacaccgaagattgcggcgtgggacagcggctgcgccacaaggacagcgagcggttcttc
gcggtcgaatgggcggacgagccaacgcgcgcgttcgagaccggcgtcgtgatcaccgtg
cgcaatgacaagggcgtgctggcgcgcgtagccgccacgttggcggatgcggaagcagac
atcacgcatgtggaaatggccgatgagacgccgcaggattcgaccgaccttcgcttcgtg
atcgcggtgcgcgatcgcgcgcacctcgacgccgtgctgcgcgccgcccgacgaaccgcc
tcggtgctgaccgcggcgcgcacagtgccggcgccctga
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