Variovorax paradoxus EPS: Varpa_4991
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Entry
Varpa_4991 CDS
T01392
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpe03019
]
Varpa_4991
Messenger RNA biogenesis [BR:
vpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Varpa_4991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_28
AAA_33
AAA_18
AAA_16
AAA_22
AAA_29
AAA_23
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ADU39151
UniProt:
E6V272
LinkDB
All DBs
Position
5435139..5436017
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AA seq
292 aa
AA seq
DB search
MMNLDLVLITGMSGSGKSVALHALEDAGYYCVDNLPPELLTSFIALQHEQQATRVAIAMD
VRSGVSLPIVPQQLEALRRDGVSLRSLFLDATTDALLRRYSETRRRHPLSRQESRTDVPE
QHRVLVQAIELERELLADLRDGADVIDTSLIRPAQLQSYIKALISAPQNALTLVFESFAF
KRGVPLDADYVFDVRMLPNPHYVPALRQLTGRDTPVIEWLREHDDVARMYDDIEQFLSHW
IDALARDHRSYVTVAIGCTGGQHRSVFLVEQLAHTFGTRWGALKRHRELDAN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacctcgacctggtgctcatcaccggcatgtcgggctcgggcaagtccgtggcg
ctgcatgcgctggaagacgccggttactactgcgtcgacaacctgccgcccgaactcctc
acctcgttcatcgcgctgcagcatgagcaacaggccacgcgcgtggccatcgcgatggac
gtgcgcagcggcgtgtcgctgccgatcgttccgcagcaactcgaagcgctgcgccgcgac
ggcgtgtcgctgcgctcgctgttcctcgacgccaccactgacgcgctgctgcgccgctat
tcggaaacccgtcggcgccacccgctctcgcgccaggaaagccgcaccgacgtgcccgag
cagcatcgcgtgctcgtgcaggccatcgaactcgaacgcgagctgctggccgacctgcgc
gacggtgccgacgtgatcgacaccagcctcattcgccccgcgcaactgcagagctacatc
aaggcgctgatctccgcgccgcagaacgcgctcacgctggtgttcgagtcgttcgccttc
aagcgcggcgtgccgctcgatgcggattacgtgttcgacgtgcgcatgctgcccaacccg
cactacgtgccggcgctgcgccagctcacgggccgcgacacgcctgtgatcgagtggttg
cgcgagcatgacgacgtggcgcgcatgtacgacgacatcgagcaatttctttcgcactgg
atcgatgcgctggcgcgcgaccatcgcagctacgtcacggtggccatcggctgcacgggc
gggcagcaccgctcggtgtttcttgtcgagcagttggcacacaccttcggcacccgctgg
ggtgcgctcaagcggcaccgcgaactcgacgcgaactaa
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