Variovorax paradoxus EPS: Varpa_5003
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Entry
Varpa_5003 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02033
peptide/nickel transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5003
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_5003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ADU39163
UniProt:
E6V324
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All DBs
Position
5446983..5447933
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AA seq
316 aa
AA seq
DB search
MSLFLFKRLATLIGTLIGASVIVFLVLEILPGNAAQMLMGPDASPDAVAALATKLGLDQP
AWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTVPLALLAMAFTVVIALLVGVTA
AARHNKLGDVGLMGMAQVGIAIPNFWFAIMLILVFSVQLQWFSAGGFEGWGEGIFAGLKS
LLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVI
TVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAALVVIVNFVV
DVLYAVIDPRIKASDI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtttctattcaagcgcctcgccacgttgatcggcacgttgatcggcgcttcg
gtcatcgtcttcctcgttctggagatcctgcccggcaacgccgcgcagatgctcatgggt
cccgacgcgtcgcccgacgccgtggccgcgctggccaccaagctgggcctcgaccagccc
gcgtggacccgctactggcactggatcggcggcctcctcaccggcaacctgggcgacagc
tacgcctacagctcgccagtgctcgacctcatcctcgaacgcctcgccctcaccgtgccg
ctcgcgctgctggccatggcgttcaccgtggtcatcgcgctgctggtgggcgtgaccgcc
gcggcgcgccacaacaagctcggcgacgtgggcctgatgggcatggcgcaggtcggtatc
gcgatcccgaatttctggttcgcgatcatgctgatcctggtgttctcggtgcagttgcag
tggttctcggccggtggcttcgagggctggggcgaaggcatcttcgcgggcctcaagtcg
ctgctgctgcccgcgctgtcgctggcggtggtgcaggcggcgatcctcgcgcgcatcacg
cgctcggccgtgctcgaggtgatgcgcgaagacttcgttcgaaccgcgcgcgccaagggc
gtctcgcagcgcatggtgctgtggacccatgtgctgcgcaacgcgatgatcccggtcatc
acggtgatgggcatgcagttttccgagctgctcgccggcaccatcgtggtggagaacgtg
ttctacctgccgggcctcggccgcctgatcttccaggccatcagcaaccgcgacctgatc
gtggtgcgcaactgcgtgatgctgctcgcggccctggtggtcatcgtgaatttcgtggtc
gacgtgctctatgccgtgatcgatccgcgcatcaaggcgagcgatatatga
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