Variovorax paradoxus EPS: Varpa_5004
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Entry
Varpa_5004 CDS
T01392
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02034
peptide/nickel transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5004
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_5004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ADU39164
UniProt:
E6V325
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All DBs
Position
5447930..5448805
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AA seq
291 aa
AA seq
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MSSVVAPSAAALKVPGFWHRALHHRSFVIGGVLTLLLLLAAALSLVWTPWSPYEMDMANK
LKPPTGSHWLGTDTYGRDVASLLLVGARASILVGVIAVGIGLVVGTALGLLAAAKRGWVE
EAIMRLTDFSLAFPAILSAIMMTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSRE
YIAAARACGKGSFSITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSW
GRMLSEAQTMMFQSPLLAVFPGMAIAMAVLGLNLLGDGLRDLLDPRLARAR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtcgtcgctcccagcgccgccgcgctcaaggtgcccggcttctggcaccgt
gcgctgcatcaccgcagcttcgtcatcggcggcgtgctcacgctgctgctcctgctggcc
gccgccctctcgctcgtctggacgccttggtcgccctacgagatggatatggccaacaag
ctcaagcccccgaccggctcgcactggctgggcaccgacacctatggccgcgacgtggcc
tcgctgctgctggtgggcgcgcgggcgtcgatcctcgtgggcgtgatcgcggtcggcatc
ggcctggtggtcggcacggcgctcggcctgctcgcggcagcgaagcgcggctgggtcgag
gaagccatcatgcggcttaccgacttctcgctcgcgttcccagcgatcctctcggcgatc
atgatgacggccgtgttcggcgccggcatcgtcaacgccatcgtcgcgatcggcatctac
aacatcccgacctttgcgcgcatcacgcgcgcctcggccaatgcgatctggtcgcgcgag
tacattgccgctgcgcgcgcctgcggcaagggttcgttctcgatcacgatgcagcacgtg
ctgccgaacatctcggctgtgttgatcgtgcagatcaccatccgcttcgccatcgcgatc
cttgccgaagcagcgctctcgtacctcggcctcggcacgcagccgccgcagccgtcgtgg
ggccgcatgctcagcgaagctcagacaatgatgttccagtcgccgctgctggccgtgttc
cccggcatggccatcgcgatggcggtgttgggcctcaacctgctcggcgacggcctgcgc
gatctgttggaccctcgcctggcgagagcaaggtaa
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