KEGG   Variovorax paradoxus EPS: Varpa_5024
Entry
Varpa_5024        CDS       T01392                                 
Name
(GenBank) transcriptional regulator, ArgP, LysR family
  KO
K05596  LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpe03000]
    Varpa_5024
   03036 Chromosome and associated proteins [BR:vpe03036]
    Varpa_5024
Transcription factors [BR:vpe03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    Varpa_5024
Chromosome and associated proteins [BR:vpe03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Varpa_5024
SSDB
Motif
Pfam: LysR_substrate HTH_1 P22_Cro HTH_AsnC-type HTH_30 MarR_2 HTH_24 DUF6285
Other DBs
NCBI-ProteinID: ADU39184
UniProt: E6V345
LinkDB
Position
5466484..5467392
AA seq 302 aa
MLDYAALNALAAVVREGSFERAARALNVTPSAVSQRVKLLEERIGGALLVRGQPCVATEA
GLQLCRHVERVGMLEHELRDALPALGMGGEAHERVTVRVAVNADSLATWFMAAAAAFAVQ
EEAALLDLSVDDQDHTAERLRSGAVLAAVTALAEPVAGCNSESLGTMHYVAAASADFVKR
HFAKGVGARTLANAPSLVFDRKDRLQARWVRRICHRNVETPRHWIPSPNAFVEAACAGMG
WGMHPASMVADAMREGTLVELVPGSTLPVPLYWQQARAAPQLLRRLGTAVRAAATSGPHA
LA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcttgactacgccgccctcaatgccctggccgccgtcgtgcgcgaaggcagtttcgaa
cgcgccgcgcgcgcgttgaacgtcacgccctcggccgtctcgcagcgcgtgaagctgctc
gaagagcgcatcggcggggcgctgctggtgcgcggccagccctgtgtcgccacggaggcg
ggcctgcagttgtgccggcacgtggagcgcgtgggcatgctggagcacgaactgcgcgac
gccctgcccgcgctcggcatgggcggcgaggcgcacgaacgcgtcacggtgcgcgtggcc
gtcaacgccgacagcctggcgacctggttcatggccgcggccgcagccttcgccgtgcag
gaggaagccgcgctgctcgatctctcggtcgacgaccaggaccacaccgccgagcgcttg
cgcagcggcgccgtgctcgcggcggtgaccgcgctggccgagccggtggccggctgcaac
agcgagtcgctgggcacgatgcactacgtggccgccgcgagcgccgacttcgtgaagcgg
cacttcgccaagggcgtgggcgcgcgaacgctggcgaacgccccgagcctggtgttcgat
cgcaaggaccgcctgcaggctcgttgggtgcgccgcatctgccaccgcaacgtcgagacg
ccgcggcattggattccatcgccgaacgcgtttgtcgaagcggcgtgcgcgggcatgggc
tggggcatgcatccggccagcatggtggccgacgcgatgcgcgagggcacgctggtggaa
ctggtgccgggttcgacgctgccggtgccgctctactggcagcaggctcgcgcggcgccg
cagttgctccggcggctcggcacggcggtgcgtgcggccgccaccagcggcccgcacgcg
ctggcctga

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