Variovorax paradoxus EPS: Varpa_5031
Help
Entry
Varpa_5031 CDS
T01392
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5031
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_5031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADU39191
UniProt:
E6V352
LinkDB
All DBs
Position
complement(5475262..5476845)
Genome browser
AA seq
527 aa
AA seq
DB search
MANSLSLRRAFTAALPALCLAFSATASADTVLRTVPSSDLKILDPIWTTSNSTRNHGLMI
YDTLFGMDEKGAIKPQMVEKYTASADNKVWTFTLRPGLKFHDGAPVTSQDVIGSLARWAK
RDALGQKMYEAMDSIAAEGPDGFRMSFKQPFGVVLDALGKPSPPVPFIMPRRVAETPADK
QIDELIGSGPFTLAKADFRPGDRVIYRRNAAYVPRKEAPSGLAGGKVVNLDRVEWVLLRD
LQTQVNALLNGEVDMLEIAPLSRYADMRASEKIELVDVMPAGPFTVIYNHKVEPFNNPKA
LKAAMLAINQEAMLRAQVTVRDFYKPCTSIYLCGSVYASDKTGFFTGKPQFEEARKLLKE
SGYDGKPVVILLPGDVPALNKMPAVYGQLLKQVGFNVDVQTTDWATLVTRRAKKDLPENG
GWNAFITFWGGVDASNPITYTALTGSGDRGFFGWPTDPELEALKSQFIETTDLVRRKDIA
TRIQLRALEGGVIAPLGEGKALAAVRRGVVSGLLPSPAVLYWNVRKN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcactctcgctgcgccgcgcgttcacggccgccctgccggcactgtgcctc
gcgttctcggccacggcctccgccgacaccgtgctgcgcaccgtgccttcgtcggacctg
aagatcctcgacccgatctggaccacctccaacagcacgcgcaaccacgggctcatgatc
tacgacacgcttttcggcatggacgaaaagggtgcgatcaagcctcagatggtcgagaaa
tacaccgccagcgccgacaacaaggtctggaccttcacgctgcgcccgggcctgaagttc
cacgacggcgcgcccgtcacttcgcaggacgtcattggctcgctcgcccgctgggccaag
cgcgacgcgctcggccagaagatgtacgaggccatggacagcatcgccgcggaaggcccc
gacggctttcgcatgagcttcaagcagcccttcggtgtcgtgctcgacgcgctgggcaag
cccagtccgccagtgccgttcatcatgcccaggcgcgtggccgagacgcccgccgacaag
cagatcgacgagctgatcggctccggccccttcacgctcgcaaaggcggactttcgcccc
ggcgaccgcgtgatctatcgcaggaacgccgcctacgtgccgcgcaaggaggcaccttcg
ggcctcgccggcggcaaggtggtgaacctggaccgcgtcgaatgggtgttgctgcgcgat
ctgcagacgcaggtcaacgccctgctgaacggcgaggtcgacatgctcgagatcgcgcct
ctctctcgctacgccgacatgcgcgccagcgagaaaatcgagctggtcgacgtgatgccc
gcagggccgttcaccgtgatctacaaccacaaggtcgagcccttcaacaacccgaaggcg
ctgaaggcggccatgctcgccatcaaccaggaagccatgctgcgcgcgcaggtcaccgta
cgcgacttctacaagccctgcacctcgatctacctgtgcggctcggtctatgcgagcgac
aagacgggcttcttcaccggcaagccgcagttcgaggaggcccgcaagctgctgaaggaa
tcgggctacgacggcaagcccgtcgtcatcctgctgccgggcgacgtgccggcgttgaac
aagatgcccgccgtctacggacagttgctcaagcaggtgggcttcaacgtcgacgtgcag
accaccgactgggccacgctcgtgacgcgccgagccaagaaagacctgccggagaacggc
ggctggaatgccttcatcaccttctggggcggcgtggatgccagcaacccgatcacctac
accgcgctgaccggaagcggtgacaggggcttcttcggctggccgaccgatccggaactg
gaagcactgaagtcgcagttcatcgagacgacagatctcgtcaggcgcaaggacatcgcc
acgcgaatccagctgcgcgcactcgaaggcggcgtgatcgctccgctgggcgaaggcaag
gcgctcgccgcggtgcgccgtggcgtggtgagtggactgttgccatcgccagccgtcctg
tactggaacgtgcggaagaactag
DBGET
integrated database retrieval system
