KEGG   Variovorax paradoxus EPS: Varpa_5037
Entry
Varpa_5037        CDS       T01392                                 
Name
(GenBank) type I secretion membrane fusion protein, HlyD family
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_5037
   02044 Secretion system [BR:vpe02044]
    Varpa_5037
Transporters [BR:vpe02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Varpa_5037
Secretion system [BR:vpe02044]
 Type I secretion system
  Adhesin protein transporter
   Varpa_5037
SSDB
Motif
Pfam: HlyD_3 HlyD_D23 Biotin_lipoyl_2 CusB_dom_1 Biotin_lipoyl PTS_EIIA_1 ADIP
Other DBs
NCBI-ProteinID: ADU39197
UniProt: E6V358
LinkDB
Position
complement(5480046..5481215)
AA seq 389 aa
MTKEIQYAASEPALPPSSLLIWLIAALLVAMLGWSWFFELDEVSTGAGKVVASSKEQTIQ
SPEGGILFELKVHEGDIVNAGQVLAQFDRTKSESMVNESASRARAAMAMSARLTAEVRGT
PLVFPAEVLVDADLVHTESDLYRSRRESLQSALAGIAQALTLLRRELALTEPLVARGAAS
DVEVLRLKRQINELESRAADTRNQYIVKAREELAKANADVEAHGSITRGRSDSLTRLTFT
SPVRGIVKDIAVTTVGGVLPPGGKFMGIVPLDDKLLIEARISPRDVAFIHSGQDAIVKFT
AYDYSIFGGLTGKVTTISPDTIQDEVKRDVYYYRVYIRTDVDHLLDRSGKSRPIVPGMIA
TADIQTGSKSVLDYLLKPLNKAREALRER
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgactaaagaaattcagtacgcggcttccgagccggcgcttcctccgtcgtcgttgctc
atctggttgatcgctgcattgctcgtggcgatgctgggctggtcctggttcttcgagctc
gatgaagtctcgaccggtgctggcaaggtggtggcctcctccaaggaacaaacgattcag
tcgccggaagggggcatcctgttcgagctcaaggtgcacgaaggcgacatcgtcaacgcc
ggccaggtgctggcgcagttcgatcgcaccaagtccgaatcgatggtgaacgaaagcgcg
tcgcgcgcccgcgcagcgatggccatgtccgcacggctgaccgcggaagtcagaggtacg
ccgctggtatttccggcggaggtgctggtggatgccgatcttgtgcacaccgaaagcgat
ctgtatcgctcgcgacgcgaaagcctccagagtgccctggccggcattgcgcaagcattg
accttgctgcggcgcgaacttgcattgactgaaccgctcgtcgcacgcggtgctgccagc
gatgtcgaagtgctgcgcctgaagcgccagatcaacgaactcgaatccagggcggccgat
acccgcaaccaatacatcgtgaaagcgcgtgaggaactggccaaggcgaatgcggatgtc
gaagcgcatggttcgatcacgcgcgggcgctcggactcgctgacgcggctgaccttcacc
tcacccgtgcgcggcatcgtcaaggacatcgccgtgaccacggtgggcggcgtccttcct
cccggtggcaagttcatgggcatcgtgccgctggacgacaaactgctgatcgaggcacgg
atttcgccgcgcgacgtggctttcatccattcggggcaggacgcgatagtcaagttcact
gcgtatgactactcgatcttcggcggcctgacgggcaaggtcacgacgatctctcccgac
acgatccaggacgaagtcaagcgcgatgtttactactaccgcgtctacatccgcaccgac
gtggatcacctcctggacaggtctggaaagagccgccccatcgtgccgggaatgatcgct
accgcagatatccagacgggcagcaaatcggtcctcgactatctgctcaagccactcaac
aaggcgcgcgaggcgctgcgcgaaagatga

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