KEGG   Variovorax paradoxus EPS: Varpa_5039
Entry
Varpa_5039        CDS       T01392                                 
Name
(GenBank) type I secretion outer membrane protein, TolC family
  KO
K12543  outer membrane protein, adhesin transport system
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_5039
   02044 Secretion system [BR:vpe02044]
    Varpa_5039
Transporters [BR:vpe02000]
 Other transporters
  Pores ion channels [TC:1]
   Varpa_5039
Secretion system [BR:vpe02044]
 Type I secretion system
  Adhesin protein transporter
   Varpa_5039
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ADU39199
UniProt: E6V360
LinkDB
Position
complement(5483322..5484737)
AA seq 471 aa
MMAQGRHDAASAPREVAANERGAEGALQLRPARRLAPSQLVRDLGTMSPSKAFDMPVVAG
PLELTVAVQLAVGRHPSIGDAIATLLQHEGGVDVARAGYYPQVRVGVGGSRSNGAATARS
GTQASISASQMLYDFGKVSGAVKQSEAQVLRQQAMVLKQLDAVALEAAQAVVQVHRYQTL
LDIAKDQVQAVEKVMETAQLRASAGISTQSDPIQAESRVDSARANRLQVQTQLAQWRERL
RTLLGGAVPQVIAPLPDQLARSIPMDIVPDDGLLPDVLVARAERQAATAQIDIARAQRYP
TLSLDASANKAMAGTNANSNAPERGLNHSIALNLSSVLYQGGALDAQVRSAIAAEEAAGQ
RVETARLRVGDQARSFREQIIGAQARLGALASRKRTIAIARDLYREQYKLGTRSILDLLN
AEQEIYQAAAEEEAVQHDLWDQRIAYIGATGQTREVYGLNNQTIQGMDVRP
NT seq 1416 nt   +upstreamnt  +downstreamnt
gtgatggcgcaaggccggcacgacgcagcatcggctccgcgcgaggtcgccgcgaacgaa
cgcggcgcggagggtgccttgcaattgcggcccgcacgacgccttgcaccgagccaactc
gttcgagacctcggcaccatgtcgccatcgaaggctttcgatatgccggtcgtggcaggt
cccctggagttgaccgtggcagtgcaactggcggtaggccggcacccgtccattggcgat
gcgattgccacgctgttgcaacacgagggaggggtggacgtcgcccgtgctggctactat
ccgcaagttcgcgtgggcgtgggcggtagccgcagcaacggtgcggctactgctcgcagc
ggtacccaggcttcgatctctgcttcgcagatgctgtacgacttcggcaaggtatccggc
gcggtcaagcaatccgaagcgcaggtgttgcgccagcaagccatggtgctgaagcaactc
gacgccgtggccctggaagcggcgcaggccgtggtacaggtccatcgctatcagaccttg
ctggacattgccaaggatcaggttcaagccgtcgagaaggtgatggaaacggcgcaactg
cgcgcgagcgcgggcatcagtacccagtccgatccgatccaggcggagtcgcgtgtcgac
agcgcccgagccaaccgtctgcaggtgcaaacacagttggcgcagtggcgtgaacgtctg
cgcacgcttctgggaggtgcggttccgcaagtgattgcccccctgccggatcagctcgca
aggtccattcccatggatatcgtccccgacgacggcttgttgcccgacgtccttgtcgcc
cgggcagaacgccaggcggccacggcacagatcgatatcgcgcgcgcgcaacgctatccc
acgctcagcctggatgcctcggcgaacaaggccatggctggcaccaacgccaactccaac
gccccggaacggggcctcaatcattccattgcattgaatctgtcatctgttctctatcag
ggcggtgcgctggatgcacaggtgcgctccgcgatcgccgccgaagaggcggccggccag
cgtgtggaaaccgcgcggcttcgtgtcggagaccaggcacggagctttcgcgagcagatc
atcggagcccaggcgcgcctgggtgccttggcgtcacgcaagcggaccatcgccatcgcg
cgcgacctgtatcgcgagcagtacaagctgggaacgcgttccatcctcgatctgctcaat
gccgagcaagagatctaccaggcggcggcggaagaagaggccgtccagcacgacctttgg
gaccagcgcatcgcctacatcggtgcgaccggccagacccgtgaggtctatgggctgaac
aaccagaccattcagggaatggacgtgcggccatga

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