KEGG   Variovorax paradoxus EPS: Varpa_5040
Entry
Varpa_5040        CDS       T01392                                 
Name
(GenBank) FG-GAP repeat protein
  KO
K20276  large repetitive protein
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Varpa_5040
SSDB
Motif
Pfam: Big_12 Big_6 FG-GAP BapA_N FG-GAP_3 HemolysinCabind Cadherin_5
Other DBs
NCBI-ProteinID: ADU39200
UniProt: E6V361
LinkDB
Position
complement(5484810..5492255)
AA seq 2481 aa
MSEIVITTKTTAISVNAQSSEIRLTEASVVQFASASTKIKEMKRVGDDLLVTDVGNKVVV
IRDFFKSFNGLKSDLVLRDSNEEGQQQLVLVKLTEGPADLVATYTPIDSIEPLLIHEGTD
LSVLFWALGGGLALSGLAGSGGGDGGGPYILDLVAPAAPTVAPTNGRTITGTAEPGSTVI
VTVGDEVIGEVVVGPDGNFEIKPKNPPGDGSVITVVAKDPDGNTSPPTTATVDGVPPIAP
TVDPTNGGTITGIGESGGRVVARVGDKVIGVAVVDPEGKFTIKPTIPLGDGTVITVVAED
TAGNISPPTTATVDAMAPSVTITNDISAAGDVTFTFTFSEVVDGFGIDDVVLSAGTKGAF
NQKSPTEFTLVVKPPVGQGGVITVDVPAGAAKDKAGNDSLAAKQASQLFDKTAPGAPSVA
ITDDTAGTATGDVTFTFTFSEPVTGFEAGDVAISAGTKGTFTRVSESVYTLVVTPPATGG
GVITVDVPAGAAKDLGGNDNLAAKQASQAYDKTGAGAPSVAITDDTAGAATGDVTFTFTF
SEPVTGFEAGDVAISAGTKGAFTRVSESVYTLVVTPPATGGGVITVDVPAGAAKDLGGND
NLAAKQASQAYDKTGAGAPSVAITDDIVGAATGDVTFTFTFSEPVTGFEAGDVAISAGTK
STFARVSDSVYTLVVTPPATGGGVITVDVPAGAAKDLGGNDSLAAKQASQPYDKTAPGAP
SVAITDDTAGTATGDVTFTFTFSEPVTGFEAGDVAISAGTKGAFTRVSDSVYTLVVTPPA
TGGGVITVDVPAGAAKDLGGNDSLAAAQASQPYDKTAAGAPSVAITDDTAGAATGDVTFT
FTFSEPVTGFEAGDVAISAGTKGTFARVSDSVYTLVVSPPATGGGVITVDVPAGAAKDLG
GNDSLAAAQASQPYDKTAAGAPSVVITDDTAGTATGDVTFTFTFSEPVTGFEAGDVAISA
GTKGAFTRVSESVYTLVVTPPATGGGVITVDVPAGAAKDLGGNDSLAAKQASQAYDKTAP
GAPSVVITDDTAGTATGDVTFTFTFSEPVTGFEAGDVAISAGTKGTFTRVSDSVYTLVVT
PPATGGGVITVDVPAGAAKDLGGNDSLAAAQASQAYDKTAPGAPSVVITDDTAGPATGDV
TFTFTFSEPVTGFEAGDVAISAGTKGAFTRVSESVYTLVVTPPATGGGVITVDVPAGAAK
DLGGNDNLAAKQASQAYDKTAPGAPSVAITDDTAGTATGDVTFTFTFSEPVDGFEVGDVL
LNTGTKGAFNKKSDTEYTLVVTPPAGGSGLITVDVPAGAAKDKAGNDSLSAQQASQPYDK
TGAGAPSVAITDDTAGTATGDVTFTFTFSEPITGFDASDVVISAGTKGAFTRVSDSVYTL
VVTPPATGGGVITVDVPAGAAKDLGGNDSLAAAQASQPYDKTAAGAPSVAITDDTAGTAA
GDITFTFTFSEPVDGFEVGDVLLNTGTKGAFDKKSDTEYTLVVTPLAGGSGVITVDVPAG
AAKDKAGNDSLTAKQARQPYDTTAAGAPSVAITDDTVGTATGDVTFTFTFSEPVSGFNAA
DVVISAGTKGAFSRVSENVYTLVVTPPTIGSGVITVDVPANAAMDLGGNGSLAAPQASQE
FDGAPSVITSVAITSATSIQNQTANAGDVIKVTVILSEATTVTGSPQLALNIGGTTVQAK
YASGSGTTQLVFEYTVMPGQSDGNGISILANSLTPNGGLLLDAAGNNALLSHAAVADNPD
YRVDTSIETPTITTFIDNVGTKMGAFGAGIVTDDNTPQLNGRAEAFSTVRVYGAHLDGGY
ALLGSTTANESGEWLFTPRYQVNGTRSYRVEAEDAAGNISAPSNDFSIQILGPTEKPIEV
GPTYVWSSARAGDVNGDGFDDVLTGVYVSDARDILLGGRVLGASTIDLTPGNPSVYHQSG
IGDINGDGVNDVVTQYANRNGDGFGTAYVYLGDKKSTAWVNSQEFRTRGVGAAGDLDGNG
LSDFVRLGDGKDMQTSSVQYGTAGAITSANIQKDLNFGMSSGGGAYNGAQHSDAVGDFNG
DGLNDLVTSHGIFFGSREGGISSTANRSWITGPNADKANQVQAVSAAGDVNGDGFADVIV
QDGYQAFVVFGGTQEGPITLTAAGLGSNGFVIDTSRRGTQVTAYSVVAGIGDVNGDGLAD
VAISTYGNNYSKTDASVSKIGAATFSSNDSYIIFGKTGTDAVDPLRLGDKTGIVVPEEQA
DGASLVGMFDYNGDGLADFFAGSYNASAKEGHNSKIFTGGASLGALPSDSGSAVGTSRSN
FLTGSAGDDTIVGNGGADIIYSGSGNDTVVLNADNLSYLSKGVQSNDRLARVDGGNGIDT
LKLSDVTSLDLTGISNAGIGFINVSVGMSRIANFERIDLGDGTKDTNLKLSLLDVMDMNA
AVNVFNNSTFGNGLGHKVSRHQLVIDGGSGDTVTVANSSQWISTPAGTVSSGEQVYKIYN
SVGANQGQLLVDSDVAVTFVV
NT seq 7446 nt   +upstreamnt  +downstreamnt
atgagcgaaattgttattacaactaaaacgaccgcgatcagcgtgaacgcgcagtcgagc
gaaattcggctgacggaagcgtcggtagtgcaattcgcgagcgcaagtacaaaaattaag
gaaatgaagcgagtcggcgatgaccttctggtcaccgatgttggaaataaggtcgttgta
attcgcgattttttcaagagtttcaatggtctcaagagcgatctggtgcttcgcgattcc
aacgaagaaggccaacagcaactggttttggttaagttgaccgagggaccggcggatctg
gtcgctacctacacgccaatcgactcaatcgagccgctgctgatccatgaaggcactgat
ctcagtgttctgttttgggcgctcggtggcgggcttgctctttccgggctggcgggcagc
ggtggcggcgatggtggtgggccttacattctggatttggtggcgccagccgcgccgacc
gtggcgccgacgaatggcagaacgattaccgggacggctgagcctgggagtacggtgatc
gtcacggttggagacgaggttattggcgaggtggtggtgggtcccgacggaaatttcgag
atcaagccgaaaaatccgccgggcgatggaagtgtgatcacggtggtggcgaaggatcct
gacggaaataccagtcctcccaccacagcgaccgtagatggcgtgccgccaatcgcacca
actgtggatccgacgaatggcggaaccatcaccgggataggcgagtctggggggcgcgtg
gtcgccagggttggcgataaggttatcggcgtcgcggtggtcgatcccgaagggaagttc
acgatcaaaccgacaatcccgttgggtgacggaactgtgatcacggtggtggccgaggat
actgccggaaatatcagtcctcccaccacggcgaccgtagatgcgatggctccgagcgtg
accatcaccaacgacatctccgccgcgggcgacgtcaccttcaccttcaccttcagcgag
gtggtcgatggcttcggtatcgacgacgtggtcctgagcgccggcaccaagggcgctttc
aaccaaaagagccccaccgaattcacgcttgtggtcaagccaccagtcggccagggcggt
gtcatcaccgtcgacgtgccagccggtgcggccaaggacaaggccggcaacgacagcctg
gcggccaagcaggccagccagctcttcgacaagacggcgcctggcgcaccgagcgtggcc
atcaccgacgacaccgccggtacagccacgggtgatgtcaccttcaccttcactttcagc
gagccggtcaccggcttcgaggctggtgatgtagccatcagcgccggcaccaagggcacc
ttcacccgcgtgagcgaatccgtctacacgctggtggtcacgcctcctgccactggcggt
ggtgtcatcaccgtcgacgtgccagccggtgcggccaaggatctgggcggcaacgacaac
ctggctgccaagcaagccagccaggcctacgacaagacgggagcgggcgcgccgagcgtg
gctatcaccgacgacactgccggcgctgccactggcgacgtcacgttcaccttcaccttc
agcgagccggtcaccggcttcgaggctggtgacgtggccatcagcgccggcaccaagggc
gccttcacccgcgtgagcgaatccgtctacacgctggtggtcacgcctcctgccactggc
ggtggtgtcatcaccgtcgacgtgccagccggcgcggccaaggatctgggcggcaacgac
aacctggctgccaagcaagccagccaggcctacgacaagacgggagcgggcgcgccgagc
gtggctatcaccgacgacatcgtcggggccgccacgggtgacgtcaccttcaccttcacc
ttcagcgagccggtcaccggcttcgaggctggtgatgtggccatcagtgccggcaccaag
agcaccttcgcccgcgtgagcgacagcgtctacacgttggtggtcacgcctccggccacc
ggcggcggtgtcatcaccgtcgacgtgccagcaggtgccgccaaggacctgggcggcaac
gacagtttggcggccaagcaagccagccagccctacgacaagacggcgccgggcgcaccg
agcgtggccatcaccgacgacactgccggcaccgccacgggtgatgtcaccttcaccttc
actttcagcgagccggtcaccggctttgaggctggtgatgtggccatcagtgccggcacc
aagggcgccttcacccgcgtgagcgacagcgtctacacgctggtggtcacgccgccggcc
actggcggtggtgtcatcaccgtcgacgtgccggcaggtgccgccaaggacctgggcggc
aacgacagccttgctgcggctcaggccagccagccctacgacaagacggcagcgggcgcg
ccgagcgtggccatcaccgacgacactgccggcgctgccactggcgacgtcacgttcacc
ttcaccttcagcgagccggtcactggcttcgaggctggtgatgtggccatcagtgccggc
accaagggcaccttcgcccgcgtgagcgacagcgtctacacgttggtggtctcacctcct
gccaccggcggtggtgtcatcaccgtcgacgtgccagcaggtgccgccaaggacctgggt
ggcaacgacagccttgctgcggctcaggccagccagccctacgacaagacggcagcgggc
gcgccgagcgtggtcatcacagacgacactgccggcaccgccacgggtgatgtcaccttc
accttcactttcagcgagccggtcaccggctttgaggctggtgatgtggccatcagtgcc
ggcaccaagggcgccttcacccgcgtgagcgaatccgtctacacgctggtggtcacgcct
ccggccaccggcggcggtgtcatcaccgtcgacgtgccagccggtgcggccaaggacctg
ggtggcaacgacagcctggcggccaagcaagccagccaggcctacgacaagacggcgccg
ggcgcaccgagcgtggtcatcaccgacgacaccgccggcaccgccacgggcgacgtcacg
ttcaccttcaccttcagcgagccggtcaccggcttcgaggctggtgatgtagccatcagc
gccggcaccaagggcacattcacccgcgtgagcgacagcgtctacacgctggtggtcacg
ccgccggccactggcggcggtgtcattaccgtcgacgtgccagcaggtgccgccaaggac
ctgggcggcaatgacagccttgctgcggctcaggccagccaggcctacgacaagacggcg
ccgggcgcaccgagcgtggtcatcaccgacgacaccgccggccctgccacgggagacgtc
accttcaccttcaccttcagcgagccggtcaccggcttcgaggctggtgatgtggccatc
agcgccggcaccaagggcgccttcacccgcgtgagcgaatccgtctacacgctggtggtc
acgcctccggccaccggcggcggtgtcatcaccgtcgacgtgccagccggcgcggccaag
gatctgggcggcaacgacaacctggctgccaagcaagccagccaggcctacgacaagacg
gcgccaggcgcgccgagcgtggccatcaccgacgacaccgccggcaccgccacgggagac
gtcacctttaccttcaccttcagtgagccggtcgatggcttcgaggtcggtgacgtgctc
ctgaacaccggcaccaagggcgctttcaacaaaaagagcgataccgaatacacgctcgta
gtcacgccgccggccggcggcagcggtctcatcaccgtcgacgtgccagccggtgcggcc
aaggacaaggccggcaacgacagcctgtcggcccagcaggccagccagccctacgacaag
acgggagcgggcgcaccgagcgtggccatcaccgacgacaccgccggtacagccacgggc
gacgtcacgttcaccttcaccttcagcgagccgatcaccggcttcgacgcaagcgacgtt
gtcatcagcgccggcaccaagggcgccttcacccgcgtgagcgacagcgtctacacgctg
gtggtcacgcctcctgccaccggcggcggtgtcatcaccgtcgacgtgccagcaggtgcc
gccaaggacctgggcggcaacgacagccttgctgcggctcaggccagccagccctacgac
aagacggcagcgggcgcgccaagcgtggccatcaccgacgacaccgccggcaccgccgca
ggggacatcactttcacgttcaccttcagtgagccggtcgatggcttcgaggtcggtgat
gtgctcctgaacaccggcaccaagggcgctttcgacaaaaagagcgataccgaatacacg
ctcgtggtcacgccgctggccggcggcagcggtgtcattaccgtcgacgtgccagccggt
gcggccaaggacaaggccggcaacgacagcctgacggccaagcaggcccgccagccctac
gacacgacggcagcgggtgcgccgagcgtggccatcaccgacgacaccgtcggcaccgcc
acgggcgacgtcaccttcaccttcaccttcagcgagccggtcagcggcttcaatgccgcc
gacgtggtcatcagcgcaggcaccaagggcgccttcagccgtgtgagcgaaaacgtctac
acgctggtggtcacgccgccgaccatcggcagcggtgtcatcactgtcgacgtgcccgcg
aacgcggccatggacctgggcggcaacggcagcctggcggctccacaggccagccaggag
tttgatggtgcgcccagcgtcatcacgagcgttgccatcactagcgcaacctccatccaa
aaccagactgcgaatgctggcgatgtgatcaaggtcacggtcatcctgagcgaagcgacc
accgtcactggatcgccccaactggccttgaacatcggtggcaccacagtccaggccaaa
tacgcatcgggcagcgggaccactcagctggtcttcgagtacacggtgatgccaggtcaa
agcgatggcaacggcatcagtattcttgccaacagcctgaccccgaacggagggctgctg
ctggacgcggctggaaacaatgccctgttgtctcatgccgcagtggctgacaaccccgat
taccgggtagacacatcgatcgagacgcccacgatcactaccttcatcgacaacgttgga
acgaagatgggtgcgttcggagcaggaatcgtcaccgacgacaacacgcctcaactgaac
ggccgtgctgaagcgttcagcaccgtccgcgtctatggcgcgcacctggacggcggctac
gcgctgctggggtccaccaccgccaacgaatcgggcgagtggctgttcaccccacggtat
caagtcaacgggactcggtcataccgcgtcgaagcggaagatgcggccggaaacatcagc
gccccaagcaacgacttttctattcaaatcctgggaccgaccgagaagcccatagaggtt
ggaccaacgtatgtctggagttcggcacgcgccggtgacgtcaacggcgatggtttcgac
gatgtcttgacgggcgtatacgtcagcgatgcccgggacattctgcttggcggaagagtg
ctcggcgcctctactatcgacctcacgcccggcaatccttcggtgtatcaccaatcgggg
atcggcgacatcaatggcgatggcgtcaacgacgttgttacccagtacgccaacaggaac
ggagatggatttgggactgcctacgtttatcttggcgacaagaaaagtacggcctgggtt
aattctcaagaattccgcacccgaggcgttggtgccgcgggtgatttggatggcaatggg
ctgtccgacttcgttcgcctcggcgacggcaaggatatgcagacttcgtctgtccaatac
ggcaccgcgggtgccatcacttcggccaacatccagaaggatctgaacttcggcatgtcc
tccggaggcggcgcctacaacggggcacagcacagcgacgcagtgggcgacttcaatggc
gatggtctgaacgacctggtaacgagccacggcatcttctttggcagcagggagggaggc
atctcgagcacggcaaatcgttcctggatcacaggcccgaacgccgataaggccaatcaa
gtgcaggcggtcagcgcggcgggcgatgtgaacggcgacggattcgcggatgtcatcgtt
caggacggctatcaggctttcgtcgtattcggcggcacccaagaaggcccaatcacactc
acggcagccggcctgggtagcaatggtttcgtgatcgataccagccgtagaggaacccaa
gtcaccgcgtacagcgtggtggcgggcattggcgacgtcaatggcgatgggttggccgac
gtcgctatcagtacctacggaaataactactcaaagaccgacgcctcggttagcaaaatt
ggtgcagcgacatttagtagcaacgactcgtacatcattttcggcaagacaggtaccgac
gcagtcgatccgctgagactgggtgacaaaaccggcattgttgttcctgaagagcaggcc
gatggggcttcgctcgtgggcatgttcgactacaacggcgatggactcgctgatttcttt
gcgggttcgtacaacgcctccgccaaagaaggccacaacagcaagatcttcaccggtggc
gcttcgctgggcgcactgccctcggacagcgggagcgcggtgggtacgtcgagaagcaat
ttcctgaccggcagcgcgggagacgacaccatcgtcggcaatggaggcgctgacatcatc
tacagcggatcggggaacgacaccgtggtgctgaatgccgacaacctctcttatctgtcg
aagggcgttcaaagcaatgaccgactggcccgggtggacggaggcaatggcatcgacaca
ctgaagttgtcggacgtgacgtctctcgacttgaccggcatcagcaacgcaggcatcggc
ttcatcaacgtgtcggtcggcatgtcgcgcattgccaacttcgagcgcatcgacttggga
gacggtaccaaagacacgaacctgaagctttccttgctcgacgtcatggacatgaatgcg
gcagtcaatgtcttcaacaactcgaccttcggcaacgggctgggccataaagtgtcgcgc
caccaactggtgatcgacggtgggtccggcgatacggtgaccgtggcgaattccagccaa
tggatatccaccccggccggaaccgtgagcagcggcgagcaggtctacaagatctacaac
agcgtcggtgcaaaccagggacagttgctggtcgacagcgacgttgccgtgacgttcgtt
gtctga

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