Variovorax paradoxus EPS: Varpa_5106
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Entry
Varpa_5106 CDS
T01392
Name
(GenBank) TROVE domain-containing protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
vpe
Variovorax paradoxus EPS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
TROVE
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
ADU39266
UniProt:
E6V472
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Position
complement(5553900..5555453)
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AA seq
517 aa
AA seq
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MANLQLFQTQRGALLPSANALNEAGGVAYALSPKHQLAQLAATGCLNNTFYAHAQDQLDA
VLALAREVDPVFVAKTAVYARRAGHMKDMPALLAATLAVRDVSLLAKVFPRVVDNGKMLR
NFVQMLRSGAVGRKSLGTRPKKLVQQWLLQATEAQLLNASVGNTPSLADVVKMVHPKPAE
AWRAAWFAWLIDRPYALEALPPVTQAFERFKRDRSLEVPDVPFQMLTALELDAQGWAQIA
QRGSWQMVRQNLNTFARHGVFELPGLAKAVAAKLRDPQAVAKARVLPYQLMAAFTATGAE
VPHVVKEALQDAMELALANVPVFEGRVVVCPDVSGSMSSPVTGHRGSATSAVRCIDVAAL
VAAAVLRRNADARVLPFETKVVSLQLNPRDSVMTNAAKLAAVGGGGTSCSAPLALLNKEK
AKADLVVLVSDNESWADRARGRGTTTMQEWAAFKERNPTARLVCIDIQPYATTQAQERDD
VLNIGGFSDEVFKLLAVYAAGGLGADHWVGVIEETSI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccttcaactcttccagacccagcgcggcgcgctgctgccttcggccaatgcg
ctcaacgaagcgggtggcgtggcttacgcgctgtcgcccaagcaccagctggcgcagctc
gccgcgaccggttgcctgaacaacaccttctacgcacacgcgcaagaccagctcgacgcc
gtgctggccctggcccgcgaagtcgatccggtgttcgtcgccaagacggccgtgtacgca
cgccgtgccggccacatgaaggacatgcccgcgctgctggccgcgacgctggcagtgcgc
gacgtgtcgctgctcgccaaggtgttcccccgcgtggtggacaacggcaagatgctgcgc
aacttcgtgcagatgctgcgttcgggtgccgtgggccgcaagtcgctcggtacgcgtccg
aagaagcttgtgcagcaatggctgctccaagcgaccgaggcgcaactgctgaacgcctcg
gtgggcaacacgccttcgctggccgacgtggtgaagatggttcaccccaagcccgcggaa
gcatggcgcgccgcgtggttcgcatggctgatcgatcgtccgtatgcgctggaggcgctg
cccccggtgacgcaggcgttcgaacgcttcaagcgcgaccgttcgctcgaggtgcccgac
gttccgttccagatgctgaccgcgctggagctcgatgcccagggctgggcgcagatcgcg
cagcgtggatcgtggcagatggtgcgtcagaacctgaacacctttgcgcgccacggcgtg
ttcgagctgccgggcctcgccaaagcagtggctgccaagctgcgtgacccgcaggccgtg
gccaaggcgcgtgtgctgccgtatcagctgatggcggccttcactgccaccggcgccgag
gtgccgcatgtggtgaaggaagcgctgcaggacgcgatggaactcgcgctggccaacgtg
ccggtgttcgagggccgcgtggtggtgtgccccgacgtgtcgggctcgatgagctcgcca
gtgacgggtcaccgcggttctgcaacttcggcggtgcgctgcatcgacgtggctgcgctg
gtcgctgccgccgtgctgcgccgcaatgcggatgcgcgtgtgctgcccttcgagacgaag
gtggtgtcgctccaactgaatccgcgtgattcggtgatgaccaacgcggccaagctggcg
gcggtgggtggcggcggtacctcgtgcagcgcgccgctggcattgctgaacaaggagaag
gccaaggccgatctggtggtgctggtgtccgacaacgaatcgtgggccgaccgtgcacgt
ggccgcgggaccacgacgatgcaggaatgggcggcgttcaaggagcgcaacccgacggcg
cggctggtgtgcatcgacatccagccctatgcgaccacccaggcgcaggagcgtgacgat
gtgctgaacatcggcggcttcagcgacgaagtgttcaagctgctggcggtgtatgccgcg
ggcggcctgggcgccgaccactgggtgggtgtgatcgaagagacttcgatctga
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