KEGG   Variovorax paradoxus EPS: Varpa_5115
Entry
Varpa_5115        CDS       T01392                                 
Name
(GenBank) DNA polymerase B region
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpe03400]
    Varpa_5115
Enzymes [BR:vpe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Varpa_5115
DNA repair and recombination proteins [BR:vpe03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Varpa_5115
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNApolII_insertion DNA_pol_B_exo1 DNA_pol_B_2 CutA1
Other DBs
NCBI-ProteinID: ADU39275
UniProt: E6V481
LinkDB
Position
5561835..5564225
AA seq 796 aa
MTSTDLNGFILTRHWRDAPTGTEIEYWLATDAGPIKVVLPSQTSVAFVATQHRSQVEAHL
ATMPGMEIRELALKTFHQEPVVGIYAKHFRQLGRLARALQAQNIPLLEADVRPHDRYLME
RFITAGVLVEGGQSNGATIVDCRLKPAPEYRPALKVVSLDIETSQHEALYSIALDGLPDR
VVFMLGEPPRESSEPDEPGEPMDFALIYCPTRKAIIEKLNDWFERNDPDVLIGWNVIQFD
LRVLQKTANECGVPLLLGRERRPIEWRTHPGKQGYLFAPTPGRVIIDGIDALKAAVWSFP
SFSLETVSQTLLGEGKAIGDHYDKMTEIERRYQEDKPGLALYNIRDCELVLRIFEKAKLL
QFVMERAQTTGLPADHFGGSIAAFSHHYLPRMHRLGYVAPSVGEIASKAYPGGYVMDSKP
GFYDSVVVLDYKSLYPSIIRTFLVDPVGFVEGTHAADPATTVKGPQGTVFSREKHCLPEI
VTTLWHARDEAKRVKNEPLSQALKLLMNSFAGVLGATDCRFFNPKLVSAITLRGHEMMKL
TREFVEKRGYVAIYGDTDSIFIWLKRTHTNEEAHAIAATLARDINAWWTQTLREQHGLAN
FLEIEFDTHYKKFFMPTIRGSEVGSKKRYAGLGVDAKGKEEMVYRGLEMARSDWTPLARR
FQEGLLSRIFHDEPYKEFVTDYADALLAGEMDELLVYRKRLRHRLDAYQVNVPPQVRAAR
VADDYNAQLGRPKQYQNGGWIRYVMTQSGPEPMENRQSRIDYEHYLAKQLQPIADALLQP
MGESFMALTTAQQGLF
NT seq 2391 nt   +upstreamnt  +downstreamnt
gtgacatccaccgacctcaacggcttcatcctcactcgccactggcgggatgcgcctaca
ggcacggagatcgagtactggctcgcaaccgatgcggggccgatcaaagtggtcctgccc
tcccagacctctgtcgcattcgtcgcgacgcagcacaggtcgcaggtggaagcgcacctc
gcaaccatgccgggcatggaaatacgtgagctcgcgctgaagaccttccaccaggaaccc
gtcgtcggcatctatgcgaagcacttccgccagctcggccggctggcacgcgctcttcag
gcgcagaacattcccctgctcgaagccgatgtgcgcccgcacgaccgctacctgatggag
cgcttcatcaccgccggcgtgctggtggagggcgggcagtcaaacggcgccaccatcgtc
gattgcaggctcaagcccgcgcccgagtaccggccggcgctgaaggtggtgtcgctggac
atcgagacgagccagcacgaggcgctctattccattgcgctggatggtttgccggaccgc
gtcgtcttcatgctgggcgagccgccgcgtgaatccagcgaaccagatgagccgggtgag
cccatggacttcgcgctcatctattgcccgacccgcaaggccatcatcgagaagctcaac
gactggttcgagcggaacgacccggacgtcctcatcggctggaacgtcattcagttcgac
ctgcgggtgctgcagaaaacggccaacgaatgcggcgtaccgctccttctggggcgggag
cgccggcccatcgaatggcgcacgcaccctggcaagcagggctacctcttcgcacccacg
ccgggccgcgtgatcatcgatggcatcgacgcgctgaaggctgcggtatggagctttcct
tcgttcagcctcgagaccgtctcgcagacgctgctgggcgaaggcaaggccatcggcgac
cactacgacaagatgaccgagatcgagcggcgctaccaggaagacaagcccgggctcgcg
ctctacaacatccgcgactgcgaactcgtcctgcgcatcttcgagaaggcgaagctgctg
cagttcgtgatggagcgcgcacagaccacgggccttccggccgaccacttcggcggctcc
attgccgcgttcagccaccactacctgccgcgcatgcatcgcctgggctacgtggcgccg
agcgtcggcgagattgcgagcaaggcctatcccggcggctacgtgatggactcgaagccg
gggttctacgactcagtcgtggtgctggactacaagagcctctacccctcgatcattcgc
acctttcttgtagacccggtgggcttcgtggaaggcacccatgccgccgacccggcgaca
accgtcaaggggccgcaaggaaccgtcttctcgcgcgagaagcactgccttccggaaatc
gtgaccacgctctggcacgcgcgagacgaagccaagcgggtgaagaacgagccgctgtcg
caggcgctgaagctgctcatgaattccttcgccggcgtgctgggtgcgaccgactgccgc
ttcttcaatcccaagctggtgtccgccatcacgcttcgcgggcacgagatgatgaagctc
acacgggagttcgtggagaagcgcgggtacgtcgcgatctacggcgacaccgactccatc
ttcatctggctcaagcgcacccacaccaacgaagaagcgcacgccatcgcggcgacgctg
gcgagagacatcaacgcgtggtggacgcagacccttcgggaacaacatggcctcgcgaac
ttcctcgagatcgagttcgacacccactacaagaagttcttcatgccgaccatccgcggc
tcggaggtgggcagcaagaagcggtatgcaggcctcggcgtcgatgccaagggcaaggaa
gagatggtctaccgcggcctggagatggctcgcagcgactggaccccgctggcgcgccgg
ttccaggaggggctgctctcgcgcatcttccacgacgagccttacaaggaattcgtgacc
gactatgcagatgcgttgctggcgggcgagatggacgagctgctcgtctatcgcaagcgc
ctgcgccaccgcctcgatgcctaccaggtcaacgtgccgccgcaggtgcgcgcggcaaga
gttgccgatgactacaacgcccagctcgggcgcccgaagcaataccagaacggcggctgg
atccggtacgtcatgacgcagagcgggcccgagccgatggagaaccgccagtcgcgcatc
gactacgagcactacttagccaagcaactccagccgattgccgacgccctcctccagccg
atgggcgagagcttcatggctttgacgacggcacagcaaggtcttttctag

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