KEGG   Variovorax paradoxus EPS: Varpa_5163
Entry
Varpa_5163        CDS       T01392                                 
Name
(GenBank) type I secretion membrane fusion protein, HlyD family
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_5163
   02044 Secretion system [BR:vpe02044]
    Varpa_5163
Transporters [BR:vpe02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Varpa_5163
Secretion system [BR:vpe02044]
 Type I secretion system
  Adhesin protein transporter
   Varpa_5163
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_CusB Biotin_lipoyl BSH_YknX BSH_RND BSH_LcnD Tropomyosin BSH_CzcB CSD2 HH_EMRA
Other DBs
NCBI-ProteinID: ADU39319
UniProt: E6V565
LinkDB
Position
complement(5613772..5615088)
AA seq 438 aa
MKSDLPQILQDEETKRAAQTSPKGRRRQWIIGGAVAVLALVGLGFPMETVVVAPGRVIPS
DRVKSIQHLEGGIVSAVLVKEGESVKQGQSLVEIDLGGSGLNFEELTARYAATQATRVRL
MAESRGQPLSRQSFATDIDESVFEGELGAYQARSLEQRGVMAGAVSGLEQARSKQLEQQA
KVKGLSDRLELMQKELEISEQLFSEKLVGQVEVLEKRRQAEGVRSELAVARQGVISANAA
ITESQAKMAEAEGRFRRRASDELATVERQFASLSEDLARARTQRSRTVVKAPSDGIVKGL
RNSSPGWVVKPGESILEVVPDKDEIMVEARLNPNDRGFVEIGQSARVKITAYDYLRYGAV
EGKVMLVAADADRDAAIAQGAPYYRLLISMSQSHVGRVENRITAGMESEVDLRVGTDPFI
WYILRPVLKLRREAFREP
NT seq 1317 nt   +upstreamnt  +downstreamnt
ttgaaatcagacctgccgcagattcttcaggatgaagaaaccaagcgcgcggcgcagacc
tcgccgaaagggcggcggcgccaatggatcatcggcggcgcggtcgccgtgctggccctc
gtcggcctcggctttccgatggaaaccgtggtcgtcgcgccgggccgcgtgatcccctcg
gaccgcgtcaagtccatccagcatctggaaggcggcatcgtcagcgccgtgctggtgaag
gagggcgaatcggtcaagcagggccagtcgctggtcgagatcgacctgggcggcagcggc
ctgaacttcgaggaactcaccgcgcggtacgccgccacgcaggccacgcgcgtgcgcctc
atggccgagagccgcggccagccgctcagccgccagtcctttgccaccgacatcgacgag
agcgtgttcgaaggcgaactcggcgcctaccaggcgcgctcgctcgaacagcgcggcgtg
atggccggcgcggtgtcgggcctggagcaggcacgcagcaagcaactggagcaacaagcc
aaggtgaagggcctgagcgaccggctcgagctgatgcagaaagagctcgagatctccgag
caactgttcagcgagaaactggtcggccaggtcgaggtgctggagaagcgccgccaggcc
gagggcgtgcgcagcgaactcgcggtggcgcgccaaggcgtgatttcggccaacgccgcc
atcaccgaatcgcaagccaagatggccgaggccgaaggacgctttcgccgccgcgcctcg
gacgaactggccaccgtcgagcgacagttcgccagcttgagcgaagacctcgcacgcgcc
cgcacgcagcgttcgcgcaccgtggtgaaggcgccttcggacggcatcgtcaagggcctg
cgcaattccagcccgggctgggtggtgaagcccggcgaatcgattctcgaagtggtgccc
gacaaggacgagatcatggtcgaggcccggctcaatccgaacgaccgcggcttcgtggag
atcggccagtcggcgcgcgtgaagatcaccgcctacgactacctgcgctacggcgctgtc
gaaggcaaggtgatgctggtcgcggccgacgccgatcgcgacgcggccatcgcccagggc
gcgccgtactaccgcctgctgatcagcatgtcgcagtcgcatgtgggccgtgtcgaaaac
cgcatcaccgccggcatggagtccgaagtcgacctgcgcgtaggcaccgatccgttcatc
tggtacatccttcgtccagtgctcaagttgcggcgcgaagccttccgcgaaccatga

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