Variovorax paradoxus EPS: Varpa_5179
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Entry
Varpa_5179 CDS
T01392
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5179
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_5179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ADU39335
UniProt:
E6V581
LinkDB
All DBs
Position
5634495..5638580
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AA seq
1361 aa
AA seq
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MSNEEAVSNPTPPVPPAVKAKRSRARRAMRALAWTFAGLFLAVLLLVAGAWWWLGSNTSL
AFALAQAAQRLPAGQTLESRDVTGSLRTGGHIGWLKYQSESIAVEVNDATIGWQFAPLFQ
RKVQLGEVHAKQVLIEKRGAPSEEPTQPLEQLVLPVDVDVPFRIDEVRWAGPPVLEAKNL
TGSYVYKNAEHALEVKGVDIADGHYSARIKLQGPAPMAIDAALDGRVKAPLAEDHNIDVI
AQATVKGTLAGTAARLQVAAELKPAEENADAPMEAKLQAQIAPWLPQPVIDAKADLSNVD
ASSLWPGAPETQLTGTVSVEPDPDAGASAWKASADIRNALPGPWDRSKLPVEQVQGRVGF
DGTNWTIPEATVRAGGGRIDAEGRWSPAPAPWQIRATVRSVRPGALHSELAGAPVSGQVT
AQQREDTITFDASLKAEGGAGSKSLPGFALDRALAQGQWKDQVLDLRTLRIEAQRASVDG
KLQVRVAEQAASGKLNLVLPGGGAQLEGRIAPDAGAGDIKARIDDADTLQRWVEGLPGLS
GVFAGTTAKGSARLDASWQGGWRTIQRRIENANAPAQRGIAEPTLKAALTVPRLDLNLPA
AQPGGTATAVQLRELQADLSGSLAQAALTLKGEATTGTQKITLDTRASGGIAGANQWRAA
LASLRLQAQDSARPGNPWIVELSREVTATIRAGGNPARLDVEASAASATLRGPVPGTVRI
DWQPLRFSQSGAAPNKVFRVQSKGQMQGLPMAWAGAFGASSTLSELGISGDLMFDGDWDI
DAGDTLRAKARIARQSGDIRVQAGEAALVTRITSTGTGTASERTMNSASAGGADSPSTPA
GLRQAELRLDAEGDAVRATLAWDSERAGKINADMNTRVTQRAGGWQWAPDAPLGGSIKAT
LPNLGVWSMLAPPGWRIAGTLDANATLSGNRAAPRWNGTLGADKLALRAPVEGLDLRDGR
LRASLAGDRIEITEFTLKGGAGSSARIGGQSGNRSTAASEAGTDGGSLSARGDMSWGAAP
GTATPSIRMALQGELRALRVLVRTDRQVTLSGDLQARLDAGQFTVRGKLKTDRAVIILPD
ETAPSLGTDVVVRSAAKDREAAEAAQRESARADAQAAKPQTAKPPDIVVNFDLGDDFAVQ
GRGITTRLEGDLEIRSTKLNAPPRITGEVKTVKGQYRAYGQQLDVETGVARFNGPFDNPQ
LDILAIRPNISQRAGVQISGSAQSPRVKLYSEPALSDAETLSWVILGRASATSGGESALL
QQAALAVLGKIGKSGSGGSLASRFGLDELGFKGPGSGGDLRESAVTLGKRLSKDFYVTYE
RSVGGTFGTLFIFYDLTTRLTLRGQAGQTSGLDLIYTLKYD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaagaagccgtctccaaccccacgccgcccgtgccacccgcggtcaaggcc
aagcgctcgcgcgcacgccgagccatgcgcgcgctggcatggactttcgcgggcctcttc
ctcgccgtgctgctgctcgttgcgggcgcgtggtggtggctgggctcgaacacctcgctc
gcgttcgcgctggcgcaagcggcgcagcgcctgcccgcgggccagacgctcgagagccgc
gacgtgaccgggtccctgcgcaccggcgggcacatcggctggctcaagtaccagagcgag
agcatcgccgtcgaggtgaacgacgccaccatcggctggcagttcgcgcccctcttccag
cgcaaggtgcagctcggcgaggtgcatgcgaagcaggtgctgatcgagaagcgcggtgcg
ccgagcgaagaaccgacccagccgctcgaacagcttgtgctgccggtcgatgtggatgtg
cccttccgcatcgatgaggtgcgctgggccggcccacccgtgctggaagcgaagaacctc
accggcagctacgtctacaagaacgccgagcacgcgctcgaagtgaagggcgtcgacatt
gccgatggccattacagcgcgcgcatcaagctgcagggccccgcgccgatggcgatcgat
gcagcgctcgatggccgcgtgaaggcgccgcttgccgaagaccacaacatcgacgtgatc
gcgcaagccaccgtgaagggcacgctcgccggcacggctgcgcgcttgcaggtcgccgcc
gaactcaagcccgccgaagagaacgccgatgcgccgatggaagccaagctgcaggcgcag
atcgcgccctggctgccgcagccggtgatcgacgccaaggccgatctcagcaatgtcgat
gcatcgagtctctggcccggcgcacccgaaacccagctcaccggcaccgtctcggtcgaa
cccgatccggacgcgggcgcgtccgcatggaaggcctcggccgacatccgcaacgccttg
cccggcccgtgggaccgatcgaagctcccggtcgagcaggtgcaaggccgcgtcggcttc
gacggcaccaactggaccatccccgaagccacggtgcgcgccggcggcggccgcatcgat
gccgagggccgctggagccccgcacccgcgccctggcagattcgcgccaccgtgcgcagc
gtgcggcccggcgcattgcacagcgaactggccggcgcgcccgtcagcggccaggtcacc
gcgcagcagcgcgaagacaccatcaccttcgacgcatcgctcaaggccgaaggcggcgcg
ggcagcaagtcgctgcccggctttgcgctcgaccgcgcgctggcgcagggccagtggaaa
gaccaggtgctcgacctgcgcacgctgcgcatcgaagcccagcgcgcgagcgtcgacggc
aagctccaggtgcgcgtggccgaacaggccgcgagcggcaagctcaacctcgtgctgccc
ggcggcggcgcgcagctcgaaggccgcatcgcgccggacgcgggcgcaggcgacatcaag
gcgcgcatcgatgatgccgacaccctgcagcgctgggtcgaaggcctgcccggtctctcg
ggcgtgttcgcaggcacgacggccaagggctcggcgcggctcgacgccagttggcaaggc
ggctggcggaccatccagcgccgcatcgagaacgcgaacgcaccggcacaacgcggcatc
gccgagcccacgctcaaggccgcgctcaccgtgcctcgcctcgacctcaacctgccggcc
gcacagccgggcggtaccgccaccgcggtgcaactgcgcgaactgcaggccgacctttcc
ggcagcctcgcgcaagccgcgctcacgctcaaaggcgaagccaccaccggcacccagaag
atcacgctcgacacccgtgccagcggcggcattgccggcgccaaccagtggcgcgccgcc
ctcgccagcctgcgcctgcaggcacaggacagcgcgcgcccaggcaacccgtggatcgtg
gagctgagccgcgaagtcactgccaccatccgcgcgggcggcaatccggcccgcctcgac
gtcgaagcctccgccgcttcggccacgctgcgcggcccagtgcccggcaccgtgcgcatc
gactggcagccgctgcgcttcagccagagcggcgcggcgcccaacaaggtgttccgcgtg
cagtcgaagggccagatgcagggcctgccgatggcctgggccggcgccttcggtgcgagc
tcgacgctcagcgaactgggcatcagcggcgacctgatgttcgacggcgactgggacatc
gacgccggcgacacgctgcgcgccaaggcccgcatcgcgcgccagagcggcgacatccgc
gtgcaggctggcgaggccgcgctggttacccgcatcacgagcaccggcaccggcacggcg
agcgagcgcacgatgaattccgcctcggcgggcggcgccgattcgcccagcacccccgcg
ggcctgcgccaggccgagttgcggctcgacgccgaaggcgatgccgtgcgcgccacgctc
gcatgggacagcgaacgcgccggcaagatcaacgccgacatgaacacgcgcgtcacgcag
cgcgccggcggctggcagtgggcacccgatgcgccgctgggcggcagcatcaaggccacg
ctgccgaacctgggtgtgtggtcgatgctcgcgccgccgggctggcgcatcgccggcacg
ctcgacgccaacgccacgctctcgggcaaccgcgccgcgccgcgctggaacggcacgctc
ggcgccgacaagctcgcgctgcgcgcaccggtcgaagggctggacctgcgcgacgggcgc
ctgcgcgccagcctcgccggcgaccgcatcgagatcaccgagttcacgctcaagggcggc
gccggcagctcggcccgcattggcggccagagcggcaaccgcagcaccgcggcgagcgag
gcgggcaccgatggcggctcgctctcggcgcgcggcgacatgagctggggcgccgcaccg
ggcaccgccacgccgagcatccgcatggcgctgcaaggcgaactgcgcgcgctgcgcgtg
ctggtgcgcaccgatcggcaggtcacgctctcgggcgacctgcaggcgcggctcgacgcc
ggccagttcaccgtgcgcggcaagctcaagaccgaccgcgccgtcatcatcctgcccgac
gaaaccgcgccgagcctcggcaccgacgtggtcgtgcgctcggccgccaaggaccgcgaa
gcggccgaggccgcgcagcgcgaatcggcccgcgccgatgcgcaggccgccaagccgcag
accgcgaagccgcccgacatcgtcgtgaacttcgacctcggcgacgacttcgcggtgcag
ggccgcggcatcacgacgcggctcgaaggcgacctggaaatccgcagcaccaagctcaat
gcgccgccgcgcatcaccggcgaggtgaagaccgtgaagggccagtaccgcgcctacggc
cagcagctcgatgtggaaaccggcgtggcgcgcttcaacgggcctttcgacaatccgcaa
ctggacatcctcgcgatccgcccgaacatctcgcagcgcgcgggcgtgcagatctcgggc
agcgcgcaatcgccgcgcgtgaagctctattcggagcccgcgctctccgatgcggaaacg
ctctcgtgggtgatcctcgggcgcgcttcggccaccagcggcggcgagtcggcgctgctg
cagcaggccgcgctcgcggtgctgggcaagatcggcaagtccggcagcggcggcagcctc
gcgagccgcttcggcctggacgaactcggcttcaagggcccgggcagcggcggcgatctg
cgcgagtcggcggtcacgctgggcaagcggctgtcgaaggatttctacgtgacctacgaa
cgcagcgtcggcggcaccttcggcacgctcttcatcttctacgacctgacgacacgcctc
acgctgcgcggacaggcgggccagaccagcggcctcgacctgatctacaccctgaagtac
gactga
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