Variovorax paradoxus EPS: Varpa_5190
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Entry
Varpa_5190 CDS
T01392
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpe03000
]
Varpa_5190
Transcription factors [BR:
vpe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Varpa_5190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_5
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ADU39346
UniProt:
E6V592
LinkDB
All DBs
Position
complement(5648998..5649945)
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AA seq
315 aa
AA seq
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MKHATLRQLKVFEAVARLLSFSRAAEELHLTQPAVSTQVAKLEEHAGNVLFEQFGKKIFL
TPAGAELLQISRAIIQQFEAAENAMMQFKGVSGGKLNVGVISAGDYFFPRLLVEFASRHR
GVTLNFTVHNREGLLTHIAENLTDLAIMVRPPTDLDTSNQAFAPHPYVIVAPPTHPLVGV
PGIPLKRLMREPFVVREKASDTWHSMEDGFGRELEHINIAMEIRSTETIKQAVIAGMGVS
FVSAHTISQELKAGSLCVLDVEGFPLMLNWYVVHRRTKRLPPVAQAFKDFLLSDGASLIS
QIVPFKPLESRQPQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgcaaccctgcgccagttgaaggtcttcgaggccgtcgcgcggctcttgagt
ttttcgcgcgcggcggaggagcttcacctcacccaacccgccgtctccacgcaggtcgcc
aagctcgaggagcatgcgggcaacgtgctgttcgagcagttcggcaagaagatcttcctc
acgcccgcgggcgccgagctgctgcagatcagccgcgcgatcatccagcagttcgaggcg
gccgagaacgcgatgatgcagttcaagggcgtctcgggcggcaagctcaatgtgggcgtc
atcagcgcgggcgactacttctttccgcgcctgttggtcgagttcgcaagccgccatcgc
ggcgtgacgctgaacttcaccgtgcacaaccgcgagggcctgttgacccacatcgcggag
aacctcaccgacctcgcgatcatggtgcggccgcccaccgacctcgacacatcgaaccag
gcctttgccccgcacccctacgtgatcgttgcgccgccgacgcatccgctggtcggcgtg
ccgggcattccactgaagcgtttgatgcgcgagccgttcgtcgtgcgcgagaaggcatcg
gacacctggcactcgatggaagacggcttcgggcgcgagctggagcacatcaacatcgcg
atggaaatccgcagcaccgagacgatcaagcaggcggtgatcgcgggcatgggcgtgagc
ttcgtctctgcgcacaccatcagccaggagctgaaggccggcagcttgtgcgtgctcgac
gtggaaggttttccgttgatgctcaactggtacgtggtgcaccgccgcaccaagcgcctg
ccgccggtggcgcaagccttcaaggactttctgctgagcgatggcgcatcgctgatctcg
cagatcgtgccgttcaaacctctggagtcacgacaaccgcaggcctga
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