Variovorax paradoxus EPS: Varpa_5195
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Entry
Varpa_5195 CDS
T01392
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00020
Citrate cycle (TCA cycle)
vpe00640
Propanoate metabolism
vpe00660
C5-Branched dibasic acid metabolism
vpe00720
Other carbon fixation pathways
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01120
Microbial metabolism in diverse environments
vpe01200
Carbon metabolism
Module
vpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Varpa_5195
00640 Propanoate metabolism
Varpa_5195
00660 C5-Branched dibasic acid metabolism
Varpa_5195
09102 Energy metabolism
00720 Other carbon fixation pathways
Varpa_5195
Enzymes [BR:
vpe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Varpa_5195
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Gp5_OB
Motif
Other DBs
NCBI-ProteinID:
ADU39351
UniProt:
E6V597
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Position
complement(5653630..5654529)
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AA seq
299 aa
AA seq
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MSILINKHTRVITQGITGKTGQFHTAMCRDYGNGQKCFVAGVNPNKAGKSFDGIPVFGTV
KDAKAETGATVSVIYVPPPFAAAAIDEAVDAELDLVICITEGIPVRDMIRTRHRMEGSRT
LLLGPNCPGLITPDEIKIGIMPGHIHQRGRIGVVSRSGTLTYEAASQLARFGIGQSTVVG
IGGDPVGGLKHIDVLKMFNDDPRTDAVIMVGEIGGNEEEICARWIKDHMRKPVVGFIAGA
TAPPGKRMGHAGAIVSGGRGTAQEKLAVMKECGIHVTSNPAEMGKLLASLVIPDYLPFD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctcatcaacaagcacacccgcgtcatcacgcagggcatcaccggcaagacc
ggccagttccacacggcgatgtgccgcgactacggcaacggccagaagtgctttgtcgcg
ggcgtgaacccgaacaaggcgggcaagtccttcgacggcattccggtcttcggcacggtg
aaggacgcgaaggccgagaccggcgccaccgtctcggtgatctacgtgccgccgccgttc
gccgcggccgcgatcgacgaggcggtcgatgccgagctcgacctcgtcatctgcatcacc
gaaggcattccggtgcgcgacatgatccgcacgcgccaccgcatggagggcagcaggacg
ctgctgctcgggccgaactgcccggggctcatcacacccgacgaaatcaagatcgggatc
atgccggggcacatccaccagcgcgggcgcatcggcgtggtgtcgcgctcggggacgctg
acgtatgaagcggcgagccagttggcgcgcttcggcatcgggcaatcgacggtggtgggc
atcggcggcgacccggtcggcggactcaagcacatcgacgtgctcaagatgttcaacgac
gacccgcgcaccgacgccgtgatcatggtcggcgagatcggcggcaacgaagaagagatc
tgcgcgcgctggatcaaggaccacatgcgcaagcccgtggtcggcttcatcgccggcgcc
accgcgccgcccggcaaacgcatgggccacgcgggcgccatcgtctcgggcgggcgcggc
accgcgcaggaaaagctcgcggtgatgaaggaatgcggcatccatgtgacgagcaatccg
gcggagatggggaagctgctggcatcgctcgtcatccctgactacctcccgttcgactga
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