KEGG   Variovorax paradoxus EPS: Varpa_5224
Entry
Varpa_5224        CDS       T01392                                 
Name
(GenBank) methyl-accepting chemotaxis sensory transducer
  KO
K02660  twitching motility protein PilJ
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_5224
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_5224
   02035 Bacterial motility proteins [BR:vpe02035]
    Varpa_5224
Secretion system [BR:vpe02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   Varpa_5224
Bacterial motility proteins [BR:vpe02035]
 Pilus system
  Twitching motility proteins
   Varpa_5224
SSDB
Motif
Pfam: MCPsignal PilJ Syntaxin_2
Other DBs
NCBI-ProteinID: ADU39380
UniProt: E6V671
LinkDB
Position
complement(5683407..5685725)
AA seq 772 aa
MSSIADKFKKLLPVSNGNDKARVDGSGSISLDDVDTVQVPDEKTVRIARKGESSSPVAPA
PTGFADGDGLTGGENPDALDAAALDAVPAAGRSGSSQAKQQRILAILLAVTVLLLLLVAG
SAILRSERLAQQVAATGQSLMQSQRLAKSISQALVGSASAFVEVKDSADDLSRRVAGLTN
GDDSLRLERVGNQYDEEMNKINPLVARADTSAKAVLAQRQILTQVGAALRDINQQSSTLL
EMTETVASLKMQQNATLPEISAAGQLVMLTQRIGKSTNEFFTVEGVNPDAVFLLGKDLNT
FQETTRGLLDGNAQQRFPGSKDPQTRQQLEAILKTYEQMRTQASAILGNLQGLVAAREAQ
ASILTDSEPLRKSLGDLQDKLSARTGLGAGTIVLLFVLSLAALAFAGAIGFVQVREGRER
AANAERERLAAEQTSEEAGRINNANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD
SVNYTVEELRLLVGNVQNTATRVAQTTSQVENTSTELLAASTEQLREIRETGQSVLTMAE
RINGVSTQAQESATVARQSLQAASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQE
IGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISAL
VKAIQTDTQDAVGAMERSTQGVVEGAKLSDNAGTALTEIDRVSRRLAELIEQISQSASRE
ADSANVVAANIQHIFAVTEQTGEGTRTTAQQVRELSQMAEELRRSVARFKIA
NT seq 2319 nt   +upstreamnt  +downstreamnt
gtgagctcgatcgccgacaagttcaagaaattactgcccgtgagcaacgggaacgacaag
gcccgcgtcgacggctccggttcgatatcgctcgacgatgtcgatacggttcaggttccg
gacgagaaaaccgtgcgcatcgcgaggaagggcgaaagctcgtcgcccgtcgcgcccgcg
cccaccggcttcgccgatggcgacggcctgaccggcggcgagaaccccgacgcgctcgac
gcggcggcgctcgatgccgtcccggccgcaggccgatcgggctccagccaggcaaagcag
cagcggatcctggcgatcctgctggccgtcacggtgttgctgctgctcctggtggccggc
tccgccattcttcgctcggaacgcctcgcacagcaggtggcggccaccggccagtcgctg
atgcagtcgcagcgcctggccaagtcgatctcccaggccctcgtcggcagcgcctcggcg
ttcgtcgaagtgaaggacagcgccgacgacctctcgcgtcgcgtcgcaggcctcaccaac
ggcgacgattccctgcgcctggagcgcgtgggcaaccagtacgacgaggagatgaacaag
atcaatcccctcgttgcacgtgccgacaccagcgccaaggccgtgctggcccagcgccag
atcctgacccaggtgggcgccgccttgcgcgacatcaaccagcagtcgtccacgctgctc
gaaatgacggaaaccgtcgcgtcgctgaagatgcagcagaacgccacgctgcccgaaatc
tcggccgccggccagctcgtgatgctgacgcagcgcatcggcaagtcgaccaacgaattc
ttcacggtcgagggtgtgaaccccgacgccgtgttcctgctgggcaaggacctgaacacc
ttccaagaaaccacccgcggcctgctcgacggcaatgcgcagcagcgcttccccggctcg
aaggatccgcagacgcgccagcagctcgaagccatcctgaagacctacgagcagatgcgc
acgcaggcttccgccattctgggcaacctgcagggtctggtggcggcgcgcgaagcgcag
gcttccatcctgaccgacagcgagccgctgcgtaagtcgctgggcgacctgcaggacaag
ctgtccgcccgcacgggtctgggcgccggaacgatcgtcttgctgttcgtgctgtcgctg
gccgccctggcattcgccggcgccatcggtttcgtgcaggtgcgcgaaggccgcgaacgt
gccgccaacgccgaacgcgagcgtctggccgccgagcagacttcggaagaagccggccgc
atcaacaacgccaaccaggccgccattcttcggctgatgaacgaactgcagacagtggcc
gaaggcgacctgacgcaggaagcgaccgtgacggaagacatcaccggcgccatcgccgac
tcggtgaactacacggtggaagaactgcgtttgctggtgggcaacgtgcagaacacggcg
acccgcgtggcgcagacgacgtcgcaggtggaaaacacctcgaccgaactgctggccgcc
tcgaccgaacagctgcgcgagattcgcgaaaccggccagtcggtgctgaccatggccgag
cgaatcaacggtgtgtccacgcaggcgcaagagtccgccacggtggcgcgccagtcgctg
caagccgcatcgtcgggcctgcaggccgtgcagaacgccatcggcggtatgaactccatc
cgcgaccagatccaggaaacctccaagcggatcaagcgcctgggcgagtcgtcgcaggag
attggcgaaatcaccgagctgatctcggacattaccgaacagacgaacgtgctggccctt
aatgccgccattcaggccgcatcggccggtgaagccggtcgaggcttctcggtggtggcg
gaagaagttcagcgactggccgaacgctccgcagacgccacgcgccagatttcggcgctg
gtgaaggcgattcagaccgacacccaggatgcggtgggcgccatggagcgttccacgcag
ggtgtggtcgaaggggccaagctgtccgacaacgcgggtaccgcgctgaccgagattgac
cgcgtgtcgcgccgcctcgccgagctgatcgagcagatttcgcagtccgcctcccgcgaa
gccgattcggccaacgtggtggctgccaacatccagcacatttttgcggtgaccgagcag
accggtgaaggtacgcggaccacggcccagcaggtgcgcgagctctcgcagatggcggaa
gaactgcgccgctcggtagcccgtttcaagattgcctga

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