Variovorax paradoxus EPS: Varpa_5243
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Entry
Varpa_5243 CDS
T01392
Name
(GenBank) inner-membrane translocator
KO
K10440
ribose transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5243
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_5243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADU39399
UniProt:
E6V690
LinkDB
All DBs
Position
5700543..5701532
Genome browser
AA seq
329 aa
AA seq
DB search
MNAAAASTSNPRTSALKGQLGTYLGLTVVLVGMVALFGSMSEYFLTRDTFISIANEIPAL
AVMAVGMTFVLIIAGIDLSVGSVLALSAAVTAAAILEWKLSVPLAAALGLATGLICGTVT
GAVSVAWRLPSFIVSLGMLEAVRGGAYLVTDSRTQYVGDAISGLAAPWIGGISAAFVLAV
VLVVVGQMVLTRTVFGRHVVGIGTNEEAMRLAGVDPRPIRIIVFAVTGLLAGLAGLMQSA
RLEAADPNAGVGIELQVIAAVVIGGTSLMGGRGSVVNTFFGVLIIAVLEAGLAQVGASEP
SKRIITGAVIVVAVIIDTLRQRRADRRLA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccgcagcctcgacttccaatccgcgcacctccgcactgaagggccaactg
ggcacctacctcggcctcacggtcgtgctggtgggcatggtcgcgctcttcggctcgatg
agcgaatacttcctcacgcgcgacaccttcatctcgattgccaacgaaatccccgcgctc
gcggtgatggcggtgggcatgaccttcgtgctgatcatcgcgggcatcgatctgtcggtc
ggctcggtgctcgcgctcagcgcggccgtgacggccgcggccatcctcgaatggaagctt
tcggttcctctcgcggccgcactcggcctcgccaccggcctgatctgcggcacggtgacc
ggtgcggtgtcggtcgcatggcggctgccgagcttcatcgtttcgctgggcatgctcgaa
gcggtgcgcggcggcgcttacctcgtgacggactcacgcacgcagtacgtgggcgatgcg
atctctggcctcgccgcgccgtggatcggcggcatttcggccgccttcgtgctcgcggtg
gtgctggtcgtcgtcgggcagatggtgctcacgcgcacggtcttcggccggcatgtggtg
ggcatcggcacgaacgaagaagcgatgcgcctggcgggtgtcgatccgcggccgatccgc
atcatcgtgttcgccgtcaccggtcttcttgcggggcttgcgggcctgatgcagtcggcg
cggctcgaagcggccgacccgaacgcaggcgtcggcatcgagctgcaggtgatcgcggcc
gtggtcatcggcggcaccagcctcatgggcgggcgcggttcggtggtcaacaccttcttc
ggcgtgctgatcatcgcggtgctcgaggcgggcctggcgcaggtgggcgcgagcgagccg
agcaagcggatcatcaccggggcggtgatcgtggttgcggtgatcatcgacaccttgcgc
cagcgccgcgcggaccgccgcctggcctga
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