Variovorax paradoxus EPS: Varpa_5293
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Entry
Varpa_5293 CDS
T01392
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Varpa_5293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpe03400
]
Varpa_5293
DNA repair and recombination proteins [BR:
vpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Varpa_5293
RecFOR pathway proteins
Varpa_5293
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ADU39449
UniProt:
E6V6E0
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All DBs
Position
complement(5753454..5754026)
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AA seq
190 aa
AA seq
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MIGKLTGVLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPGTGERVSLLTHFVVREDAQIL
YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELSQAITTQELGRLVKIPGIGKKT
AERLLLELKGKLGADIGLPTHAASDAQADILQALIALGYSDKEAALALKALPKDATVSEG
IKLALKALAK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgataggcaaactcaccggcgtactggccgagcgcaacccaccgcaggtggtggtcgat
tgcaacggcgtcggctacgaggtcgatgtgccgatgagcacgttctacaacctgcccggc
accggagagcgcgtttcgctgctcacgcacttcgtggtgcgcgaggacgcgcagattctc
tacggtttcggcaccgccgaggagcgtgcggcttttcgccagctcatcaagatcaccggc
gtgggtccgcgtaccgcgctcgggctgctctcgggcatgagcgtgggcgagctgtcgcag
gcgatcaccacgcaggagctcggccgtctcgtgaagatccccggcatcggcaagaagacc
gccgagcggctgctgctggagctcaagggcaagctgggcgccgatatcggactgccgacg
catgcggcctccgacgcgcaggccgacatcctgcaggcgctgatcgcgctgggctacagc
gacaaggaagccgcactcgcgctcaaggcgctgcccaaggacgcgacggtgagcgaaggc
atcaagctggcgctgaaagccctggccaagtga
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