Variovorax paradoxus EPS: Varpa_5309
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Entry
Varpa_5309 CDS
T01392
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Varpa_5309
Enzymes [BR:
vpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Varpa_5309
Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Varpa_5309
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ADU39465
UniProt:
E6V796
LinkDB
All DBs
Position
complement(5766758..5767384)
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AA seq
208 aa
AA seq
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MPPATEGGTDPGAAAGSRLRPLSSGLAVPPGASARSDVPSVRYDLAVSGTGELTPDDGVP
GDDGPREIFERGGASWYGIQFHQRKTASGERFDMTALTAAHKTLPFGTRVCVRSLVNGSE
VLVRITDRGPYAQGRVIDLSRAAAERIGLIGLGIKQVALSVVGSAGMRCGGVDVEPGEAA
APMAPGADRAKVTVPARRKAVVPQRRRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgccaccgaaggcggcaccgatccgggcgctgcggcgggttctcgcttgcgg
ccgctgtcgtcggggctggccgttccaccgggcgcttccgcgcggtcggatgtgccttcg
gtgcgctatgacctcgcggtctcgggcaccggcgagctgacgcccgacgacggcgtgccc
ggcgacgacggcccgcgcgagatattcgagcgcggcggcgcatcctggtatggcatccag
ttccaccagcgcaagacggccagcggcgagcgcttcgacatgacggccctgacggctgcc
cacaagaccctgccgttcggaacgcgcgtctgcgtgcgcagcctggtcaacggcagcgag
gtgctggtgcgcattaccgatcgcggaccctatgcgcagggccgcgtgatcgacctgagc
cgggccgctgccgagcgcatcggcctcatcggactcggaatcaagcaggtggcgctgtcg
gtcgtcggctccgcgggcatgcgctgcggcggtgtcgatgtggaaccgggcgaggctgcc
gcaccgatggcgcctggggccgatcgcgccaaggtcacggtgccggcgcgccgcaaggcc
gttgtgcctcagcgtcgccggcgctga
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integrated database retrieval system
