Variovorax paradoxus EPS: Varpa_5385
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Entry
Varpa_5385 CDS
T01392
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5385
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
Varpa_5385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
TAT_signal
G-gamma
Motif
Other DBs
NCBI-ProteinID:
ADU39541
UniProt:
E6V8B7
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All DBs
Position
5850257..5851585
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AA seq
442 aa
AA seq
DB search
MSDFNRRRFLEGSAGVAAAATVGTGSALFAPFAQAQNLTFKPEKGAKLRVLRWSRFVQGD
IDAYMANVKKFTEATGVEVRVDNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPDKL
LDVTDLAEYLGKKYGGWYPAGEAFMRPDGKKWLGLPLGASGSLIVYRESMVKAAGFATFP
KTTDDFLKLYKALKEKGTPGGMALGNATGDSTWCNWLIWSHGGKLVDKNNKVVIDSPETL
KALEYGKELYANFIPGTLSWLDPNNNKAFLDGQISVTNNGISVYYAAKNSADPKIKEMAA
DINHAVFPIGPVGVPTESHLFFNQMVMKYTKFPQAAKEFLRFMMEKEQFDPWLQGGGGYV
AQPLRFYENSAIWTSDPKNMPYRDSVKNLRPGGYDGKLGYASAGAAADFIIPNMVAEAAS
GSKTPKEAAERAQKRAERYYKV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcaatcgccgcaggtttctagagggttcggccggcgttgccgctgccgcg
actgtcggcacgggcagcgccctgttcgcaccgttcgcgcaggcgcagaacctgacgttc
aagcccgagaagggcgccaagctgcgcgtgctgcgatggagccgcttcgtgcagggcgac
atcgatgcctacatggccaacgtcaagaagttcaccgaggccaccggcgtcgaagtgcgc
gtggacaacgaaggctgggaagacgtgcgcccgaaggccgctgtggccgccaacaccggc
gcgggccccgacatcatcctgtcgaccaacgacgacgccaacctctaccccgacaagctg
ctcgacgtgacggacttggccgaatacctcggcaagaaatacggcggctggtatccggcc
ggcgaagccttcatgcgccccgacggcaagaagtggctgggcctgccgctgggcgcctcg
ggctcgctcatcgtgtaccgcgagagcatggtcaaggccgcgggcttcgcgaccttcccc
aagaccaccgacgacttcctcaagctctacaaggcgctgaaggaaaagggcacgcccggc
ggcatggcgctgggcaatgcgaccggcgacagcacctggtgcaactggctcatctggtcg
cacggcggcaagctggtcgacaagaacaacaaggtggtcatcgacagccccgagacgctc
aaggcgctggagtacggcaaggagctctacgccaacttcattccgggcacgctctcgtgg
ctggacccgaacaacaacaaggcttttctcgacggacagatcagcgtcaccaacaacggc
atctcggtctactacgccgccaagaattcggccgaccccaagatcaaggaaatggccgcg
gacatcaaccacgcggtgttccccatcggcccggtcggcgtgccgacggagtcgcacctg
ttcttcaaccagatggtcatgaagtacacgaaattcccgcaggcggccaaggagttcctg
cgcttcatgatggagaaggaacagttcgacccgtggctgcaaggcggcggcggctacgtg
gcgcagcccctgcgcttctacgagaacagcgcgatctggacctcggacccgaagaacatg
ccctaccgcgactcggtgaagaacctgcgcccgggcggctacgacggcaagctgggctac
gcgtcggccggcgccgcggcggacttcatcattccgaacatggtggccgaggcggcgagc
ggatcgaagacgccgaaggaagcggccgagcgcgcgcagaagcgtgccgagcggtactac
aaggtctga
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