Variovorax paradoxus EPS: Varpa_5406
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Entry
Varpa_5406 CDS
T01392
Name
(GenBank) ABC transporter related protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5406
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_5406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5406
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Varpa_5406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
AAA
AAA_23
RsgA_GTPase
SMC_N
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADU39561
UniProt:
E6V8D7
LinkDB
All DBs
Position
complement(5871623..5872378)
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AA seq
251 aa
AA seq
DB search
MSDPILSIRGLRKSFGPTEIMRGVDLDLLGTERHALIGPNGAGKSTLFHLISGHLAPSAG
TVHFDGHSIGGRTPQAINRLGLARSFQITNIFPKLSVFENIRLAVMRPHGLAYAFWKFID
SDRRVREETYRLLELVRLTSRAGAIAGEMAYSEQRSLEIAMTLASDPKVILLDEPMAGMS
NEETHYTAELILEVTKGRALMLVEHDMDVVFSLSDRISVLVYGQVIATGTPDEIRANASV
KEAYLGEEVAA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccgatcctcagcatccgcgggctgcgcaagtccttcggcccaacggaaatc
atgcgcggcgtggacctcgacctgctcggcaccgaaaggcacgcgctcatcggcccgaac
ggcgcgggcaagtccacgctcttccatctcatctcggggcacctcgcgccgagcgccggc
acggtccatttcgacgggcattccatcggcggccgcacgccgcaggcgatcaaccggctg
ggcctggcgcgctcgttccagatcaccaacatctttccgaagctcagcgtgttcgagaac
atccgcctcgccgtgatgcgtccgcacgggctcgcgtatgcgttctggaaattcatcgat
agcgaccggcgcgtccgcgaagaaacgtaccgcttgctggaactggtgcggctgacaagc
cgggcgggcgccatcgccggcgagatggcgtactccgagcagcgttcgctcgagatcgcg
atgacgctcgcctccgacccgaaggtgatcctcctggacgagccgatggctggaatgtcg
aacgaggaaacgcactacaccgccgagctgatcctcgaagtgaccaaagggcgcgcgctg
atgctcgtggagcacgacatggacgtggtgttctcgctcagcgaccgcatcagcgtgctg
gtctacggccaagtgatcgcgaccggcacgcccgacgagatccgcgccaacgcgagcgtg
aaggaagcctacctgggcgaggaggtggccgcatga
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