Variovorax paradoxus EPS: Varpa_5431
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Entry
Varpa_5431 CDS
T01392
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5431
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_5431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADU39586
UniProt:
E6V8G2
LinkDB
All DBs
Position
complement(5906315..5908603)
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AA seq
762 aa
AA seq
DB search
MAFPLSAPVWAQQQPGADAPEGGTGRALSTVTVTGGQPTSLPAQIPTTIEGVTREQIAET
VNATDAEDALKYLPSLVVRKRYIGDFNHAVLATRASGTGNSARSMVYADGIMLSNPLGNG
ATYAPRWGMVSPEEIERVDVLYGPFSAAYPGNSVGAVVDYVTRMPTELEAHVKLSGFASN
FDQYGSHSSPAGNQLDLSLGSRNGDWSWWLSASRTHSKGQALVFGNRLLSASTVGNAGTP
VTGAVLGLNPSNQPWWLVGGSTIYDTTQEQAKLKVAYDFSPTLRATYTLGAWNNTTHGGV
DTYLRNAFGQPVYSGRVNIAGRTYNLDAPSAVLAPTETALTHYMHGLSVKSHTGGVFDWE
VAASLFDYSSDTSRTPTTPLPGAFNGGPGRTTDMGGSGWNTFKAAGTWRPTGSAEGVGAH
VVDFGFQQDTARLRTSVGNTLDWISGSPVTPFSAFNGNTRLQSLYVQDTWRFAKDWKTTL
GLRHERWEAYGGQLGNAARLLDFTPRKNSYDSPKAAVAWQATPDWLFKASTGRAVRMPTV
SELYQGSIDGNRIVNTNPNLRPERSWTTELTAERDLKGWGLDGMLRTTLFFENTKDALYS
QALNNLVSTVQNVDAIRTRGLEVALNAVDVGVKGFDLSGSLTLTNSKITANSGFPASVGR
EQPRVPKVRASLLATYRPDAKWSYTVGMRYSGKQFGSLDNSDPNGFAYMGFSKFFVVDAR
IRYRIDRQWSAAFGIDNLNNNKYWAFHPYPQRTYVAELKFDL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcccctcagcgcgccggtgtgggcgcagcagcaaccgggtgccgatgcgcct
gaaggcggcaccggccgcgccctgagcaccgtcaccgtgaccggcggccagccgacctcg
ctgccagcgcagattcccaccaccatcgagggcgtgacgcgcgagcagatcgccgagact
gtcaacgcgaccgatgcggaagacgccctcaagtacctgccgagcctggtcgtgcgcaag
cgctacatcggcgacttcaatcacgcggtgctcgccacccgcgcctcgggcacgggcaac
agtgcgcgctcgatggtctatgcggacggcatcatgctgtcgaacccgttgggcaacggc
gccacctatgcgccgcgctggggcatggtgtcgcccgaagaaatcgagcgggtcgacgtg
ctctacgggccgttctcggcggcgtacccgggcaactcggtgggcgctgtcgtcgactac
gtgacgcgcatgcccacagagctggaggcgcacgtcaagctgagcggcttcgcctcgaac
ttcgaccagtacggcagccattcgtcgcccgccggcaaccagctggacctgtcgctcggc
agccgcaacggcgactggtcgtggtggctcagcgcctcgcgcacccacagcaaggggcag
gcactggtgttcggcaaccgccttctgagcgccagcaccgtgggcaacgcgggcacgccg
gtcaccggtgcggtgctcggactgaatccgtcgaaccagccgtggtggctggtgggcggc
tccacgatctacgacaccacgcaggagcaggccaagctgaaggtggcctacgacttctcg
cccaccctccgcgccacctacacgctgggcgcctggaacaacacgacgcacggcggcgtc
gatacgtacctgcgcaatgcgttcggccagcccgtgtattcggggcgggtgaacatcgcg
ggacgcacctacaacctcgatgcgcccagcgccgtgctggccccgaccgagaccgcgctc
acccactacatgcacggcctttcggtgaagagccacaccggcggcgtgttcgactgggaa
gtggcggcgagcctgttcgactattcgagcgacacctcgcgcacgccgacgaccccgctg
cccggtgccttcaacggcggcccgggccgcaccaccgacatgggcggctcgggctggaac
accttcaaggcggccggcacctggcggcccaccggctcggccgaaggcgtgggcgcgcac
gtggtcgacttcggcttccagcaggacacggcgcgccttcgcaccagcgtcggcaacacg
ctcgactggatcagcggatcacccgtcacgccgttctcggccttcaacggcaacacccgg
ctgcagtcgctctacgtgcaggacacctggcgtttcgccaaggactggaagaccacgctc
ggcctgcgtcacgaacgctgggaggcctacggcggccagctcggcaatgcggcgcggttg
ctcgacttcacgccgcgcaagaacagctacgactcgcccaaggcggccgttgcttggcag
gccacgcccgactggctcttcaaggcctcgaccggccgcgccgtgcgcatgccgacggtg
agcgagctctaccagggctcgatcgacggcaaccgcatcgtcaacacgaatccgaacctg
cgccccgagcgctcgtggaccaccgagctcaccgccgaacgcgacctcaagggctggggc
ctggacggcatgctgcgcaccacgctcttcttcgagaacacgaaggacgcgctctacagc
caggcgctcaacaacctggtgagcacggtgcagaacgtcgatgccatccgcacgcgcggg
ctcgaggtggcgctgaacgcggtcgatgtgggcgtgaagggattcgacctgagcggcagc
ctcacgctgacgaactcgaagatcaccgccaacagcggcttccccgcgagcgtcggccgc
gagcagccgcgcgtgcccaaggtgcgcgcctcgctgctcgcgacctaccggcccgatgcc
aaatggagctacaccgtcggcatgcgctacagcggcaagcagttcggctcgctcgacaac
agcgacccgaacggcttcgcgtacatgggcttctcgaaattcttcgtggtcgacgcgcgc
atccgctaccggatcgaccggcagtggagtgcggccttcggcatcgacaacctgaacaac
aacaagtactgggccttccacccgtacccgcaacgcacctacgtggccgaactcaagttc
gacctgtga
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