Variovorax paradoxus EPS: Varpa_5478
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Entry
Varpa_5478 CDS
T01392
Name
(GenBank) phosphoheptose isomerase
KO
K03271
D-sedoheptulose 7-phosphate isomerase [EC:
5.3.1.28
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00541
Biosynthesis of various nucleotide sugars
vpe01100
Metabolic pathways
vpe01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Varpa_5478
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Varpa_5478
Enzymes [BR:
vpe01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.28 D-sedoheptulose-7-phosphate isomerase
Varpa_5478
Lipopolysaccharide biosynthesis proteins [BR:
vpe01005
]
Core region
Varpa_5478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS_2
SIS
GKRP_SIS_N
Motif
Other DBs
NCBI-ProteinID:
ADU39633
UniProt:
E6V9E9
LinkDB
All DBs
Position
complement(5959512..5960156)
Genome browser
AA seq
214 aa
AA seq
DB search
MLEQRIQQHFIDSADLKYQTGPVLSKPISQAMQAILACVTSGGKVLACGAGVSGLLATQF
AAQFVGRFERERPELGAIALPGDATDPNADSANAIDADRFARQVRALGQAGDVLLALSAS
GQSAAVLAAVLAAHERDMTVVALLGNAVSGPPAAPGAGSSGTGGVIGRALRETDVQISVP
HERAARIHEVHLLALHCLCDGVDAQLLGEQEASS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaacggattcagcagcacttcatcgacagtgccgacctcaaataccagacc
ggaccggtcctcagcaaacccatctctcaagcgatgcaggccatcctggcctgcgtgacc
agtggcggcaaggtgctggcttgcggcgccggcgtgtcgggcctgctggccacgcagttc
gccgcgcagttcgttggccgtttcgaacgcgagcgccctgaactgggcgccatcgcactg
cccggcgacgccacagacccgaatgccgacagcgcgaacgcgatcgatgccgaccgcttc
gcccgccaggtgcgcgcgctgggccaggccggcgacgtgctgctcgcgttgagcgccagc
ggccagtcggcagcggtgcttgctgccgtgctggcggcgcacgagcgcgacatgaccgtg
gtcgcgctgctcggcaacgccgtctcgggtccgcccgcggcgcccggtgcaggcagcagc
ggcaccggcggcgtcatcggccgtgcgctgcgcgagaccgacgtccagatcagcgtgccg
cacgagcgtgcggcgcgcatccatgaagtccacctgctcgcgctgcattgcctgtgcgac
ggcgtggatgcccagttactcggagaacaggaagcttcctcatga
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