Variovorax paradoxus EPS: Varpa_5503
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Entry
Varpa_5503 CDS
T01392
Name
(GenBank) ABC sugar transporter, periplasmic ligand binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
vpe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5503
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Varpa_5503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5503
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_5503
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
DprA_N
Motif
Other DBs
NCBI-ProteinID:
ADU39658
UniProt:
E6V9H4
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All DBs
Position
complement(5985208..5986170)
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AA seq
320 aa
AA seq
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MTTFTRRIAFTAVAAAALASLPALAAEKVNLGVSIPAATHSFMGGINYWANQAKKDLEKE
HKDLKITIKTAANAPEQANQLQDLSTVTKINALVVFPFESAALTKPVAQVKAKGAYVTVV
DRGLTDTSAQDAYVAGDNTAFGKIPAEYIVKTLGGKGNVVALRGIATTLDNERMDAFNAV
LKGSPDIKLLDAKYANWNRDDAFKVTQDYLTRFKQIDAIWAADDDMAVGVLKAIEQAKRD
DIKIVFGGAGAKGMVKTIMDGKDKRIGADVSYSPKFIYDAIKLTAEARLKGEKLPATTII
PSVLITKENAKDFYHPNSPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttcacccgtcgcatcgcattcacggcggtcgccgccgcagcgctcgcgagc
ctgcctgcgctcgccgccgaaaaggtgaacctcggcgtttcgattcccgcggcgacgcac
agcttcatgggcggcatcaactactgggccaaccaggcgaagaaggacctcgagaaagaa
cacaaggacctgaagatcacgatcaagaccgcggccaacgcgcccgagcaggccaaccag
ttgcaggacctctcgacggtcaccaagatcaacgcactcgtcgtgttcccgttcgaatcc
gccgcgctcaccaagccggtcgcgcaggtcaaggccaagggcgcgtacgtcaccgtggtc
gaccgcggccttaccgataccagtgcgcaggatgcatacgtggccggcgacaacaccgcc
ttcggcaagattcccgccgagtacatcgtgaagacgctcggcggcaagggcaacgtggtc
gcgctgcgcggcattgccaccacgctggacaacgagcgcatggacgccttcaacgcggtg
ttgaagggcagccccgacatcaagctgctcgatgccaagtacgccaactggaaccgcgac
gacgccttcaaggtcacgcaagactacctcacgcgcttcaagcagatcgacgcgatctgg
gcggccgacgacgacatggccgtgggcgtgctcaaggccatcgagcaggccaagcgcgac
gacatcaagatcgtgttcggcggcgcgggcgccaagggcatggtcaagaccatcatggac
ggcaaggacaagcgcatcggcgccgacgtgagctactcgcccaagttcatctacgacgcg
atcaagctcacggccgaagcgcgcctgaagggcgagaagctgccggcgacgacgatcatt
ccttcggtgttgatcaccaaggaaaacgccaaggacttctaccacccgaactcgcctttc
tga
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