Variovorax paradoxus EPS: Varpa_5504
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Entry
Varpa_5504 CDS
T01392
Name
(GenBank) inner-membrane translocator
KO
K10440
ribose transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5504
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Varpa_5504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADU39659
UniProt:
E6V9H5
LinkDB
All DBs
Position
complement(5986305..5987342)
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AA seq
345 aa
AA seq
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MPPEQQTPPSQQPEAAAAAAHRSEAKPRWTERLHGLGPVIGLVLLCIAGTLLNSDFATVD
NAMNVLTRTAFIGIIAVGMCFVIISGGIDLSVGSMAALIAGSVIMFINWAGPASGSPMLA
VVMGAVLAIVLGAVFGLAHGLLITKGRIEPFIVTLGTLGIFRAYLTYFADGGALTLDNEL
SDLYAPVYYASLAGIPVPVWVFVIVAIIGGVILNRTAYGRYVQAIGSNEQVARYAAVDVD
RVKIMTYVLLGVCVGIATLLYVPRLGSASPTTGLLWELEAIAAVIVGGTALKGGAGSITG
TVVGAILLSVISNILNLTSIISVYLNAAVQGFVIIIVAFLQRGRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggaacagcaaactcccccgtcgcagcagcctgaagcggcagcagccgccgcg
caccgcagcgaagccaagccgcgctggaccgagcgcctgcacggcctcggcccggtcatc
ggcctcgtgctgctgtgcattgcgggcacgctgctcaacagcgacttcgcaacagtcgac
aacgcgatgaacgtgctcacgcgcacggctttcatcggcatcatcgcggtgggcatgtgc
ttcgtgatcatctcgggcggcatcgacttgtcggtgggttcgatggccgcgctcatcgcg
ggcagcgtgatcatgttcatcaactgggccggccccgcctcgggctcgccgatgctggcg
gtggtgatgggcgcggtgctggccatcgtgctgggcgcggtgttcggcctcgcgcacggc
ctgttgatcaccaaggggcgcatcgagcccttcatcgtgacgctcggaacgctcggcatc
tttcgcgcgtacctcacgtactttgccgatggtggcgcgctcacgctcgacaacgaactg
tcggacctctatgcgccggtgtactacgcgagccttgcgggcattccggtgccggtgtgg
gtgttcgtgatcgttgcgatcatcggcggcgtcatcctcaaccgcacggcctatgggcgc
tacgtgcaggccatcggatcgaacgagcaggtggcgcgctacgcggcggtcgatgtggac
cgcgtgaagatcatgacctacgtgctgctcggtgtgtgcgtgggcatcgcgacgctgctg
tacgtgccgcgcctcggctcggcctcgccgaccaccggcctcctgtgggagctcgaggcg
atcgccgcggtgatcgttggcggcaccgcattgaagggcggcgcgggcagcatcaccggc
accgtggtgggcgcgatcctgctctcggtcatcagcaacatcctgaacctcaccagcatc
atcagcgtgtacctgaacgctgcggtgcagggcttcgtgatcatcatcgtcgcattcctg
cagcgcggacgcagatga
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