KEGG   Variovorax paradoxus EPS: Varpa_5539
Entry
Varpa_5539        CDS       T01392                                 
Name
(GenBank) type VI secretion-associated protein, ImpA family
  KO
K11902  type VI secretion system protein ImpA
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_5539
Secretion system [BR:vpe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Varpa_5539
SSDB
Motif
Pfam: ImpA_N MukF_M SpGH101_helical
Other DBs
NCBI-ProteinID: ADU39694
UniProt: E6VAF0
LinkDB
Position
6028660..6029790
AA seq 376 aa
MTTRLDLPALLAPISEASPCGEDMLFSRQFDAIQEARKHDDPSLEQGEWVIELKEANWPF
VISECEKLLRDSTKDLRLAVWLTDALASQRGFEGLADGYRLLTGLCQQYWDQLHPLPEGG
DIEMRVGNVTWLIGRSVELLQRAPIVSDAHTGYGALVWETALALDQSIRRTPAQADELQR
NKVTVEQFDRIRRATPAKFLQKTHRDVQACEQALAEFEAVFDERTASNGPSFRAAKDAAA
AIRQTVERFAREAGVPMDSGAPTAPAAAPAAAGTPAPSRIEPVFDAVVPHHAPAAAPAAL
PPGIHSRAQAIAQLKEVAAYFEKTEPSSPAAYMANKAARWADMPLHAWLRNVIKNEQELA
QLVDLLDLPKNDDESR
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgacgacgcggctcgacctgccggccctgctggccccgatctcggaagcctcgccctgc
ggcgaggacatgctgttctcgcggcagttcgacgccattcaagaggcgcgcaagcacgac
gacccgtcgctcgagcagggcgagtgggtcatcgagctgaaggaagccaactggcccttc
gtgatctccgagtgcgagaagctgctgcgcgactccaccaaggacctgcggcttgccgtg
tggctcaccgacgcgctggccagccagcgcggcttcgagggcctggccgatggctaccgc
ctgctcaccggcctctgccagcagtactgggaccagctgcatccgctgcccgagggcggc
gacatcgagatgcgcgtgggcaacgtcacgtggctgatcgggcgttccgtcgaactgctg
cagcgcgcgcccatcgtgagcgatgcccacaccggctacggcgcactggtctgggagacc
gcactcgcgctcgaccagagcatccgccgcacgcccgcgcaggccgacgagttgcagcgc
aacaaggtgacggtcgagcaattcgaccgcatccgccgcgcaacgcccgccaagttcctg
cagaagacgcatcgcgacgtgcaggcctgcgagcaggcgctggccgagttcgaggccgtg
ttcgacgaacgcaccgcctccaacggcccgagtttccgcgccgccaaggatgcggccgcg
gccatccgccagacggtcgagcgcttcgcgcgcgaagcaggcgtgccgatggacagcggc
gcgccgaccgcgcccgcagcagcgccggccgccgccggtacgcccgcgccctcgcgcatc
gagccggtgttcgatgccgtggtgccgcatcacgcgccggcggcggcacccgccgcgctg
ccgcccggcatccacagccgcgcacaggccattgcccagctcaaggaagtggcggcgtat
ttcgagaagaccgagccttcgagccccgctgcctacatggcgaacaaggccgcgcgttgg
gccgacatgccgctgcacgcgtggctgcgcaacgtgatcaagaacgagcaggaactggcc
cagttggtggacctgctcgacctgcccaagaacgacgacgagtcgcgctga

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