Variovorax paradoxus EPS: Varpa_5542 Help Entry Varpa_5542        CDS       T01392                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism vpe  Variovorax paradoxus EPS Pathway vpe03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vpe00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Varpa_5542  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vpe02044]     Varpa_5542 Secretion system [BR:vpe02044]  Type VI secretion system   Imp/Vas secretion system core components    Varpa_5542 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical LPG_synthase_TM Motif Other DBs NCBI-ProteinID:  ADU39697 UniProt:  E6VAF3 LinkDB All DBs Position complement(6031645..6035490) Genome browser AA seq 1281 aa AA seqDB search MRRFFSFLADPRTLSVIGAIALGAFLLIGAQTLEIGAIWAVGIFAVLLLLWLLVWFIRRM RTRSANRKLGDMLEDQADAAVRDSDPERKAEIDELRGRMVEAVKTIKTSKIGQMSGSEAL YELPWYMVIGNPAAGKSSAILNSGLQFPFADKGNAVIQGIGGTRNCDWFFTTEGIVLDTA GRYSIHQEDRKEWFGFLDLLKKYRPKAPINGIIITASIPELIGSRPDFAIQLAKNLRQRM QELTERLEVFAPVYVMFTKADLITGFAEFFGDSDKMERDRVWGASLPYDGDEKQDAVALF DKRFDELYLGLKEISVSHFASHRGSDPSPELLIFPLEFAAIKPALRAFLATLFESNPFQH KPVFRGFYFTSALQEGTMRSLSTERIAKRFGLTLNNAASKSKEIYSQNGFFLRDLFSKVI FADKKTVRQFSSPVKARVRYVSFFAFVAVLGLLLGGWTWSYLGNRQLVENVQADLDKVVK LQASDNGLRTRFEALGILQDRIEQLEKFRNDRPLSLSLGLYQGNQLEDKLVAEYYGGVKQ LMLAPVSDNLQAFLREVNAHPERLRRADAAGNPAAPVAVSAATPATPPAAESGGLYAGSS PADVQDAYNALKTYLMLSDKRQVETAHLTDQISRFWRGWLESNRGDMPRAAVIRDAERMI TFYLRRVGDDNWPALADTNLALVEQTRDNLRRVVRGMPARERVYAEIKARASTRFAPMTV ARILGATAGAESEGTIAGSVAISGAFTREAWQQYVDDAIRDAANKETSSKDWVLNVAGND DLTLEGSPEQIRKTLATMYKLEYAKEWQRFLQGIAVKDMGSFEQAVVAMNLLGDPQNSPI RKVFDTVYDQTSWDNPSLVNAGLQQARTGALNWFKNLFSRATPSQVNVNIDASGNRTEIP MGPIGREFAGVARLVVERDNTSLLRGYLGTLSKLRGRFNQIKNQGDPGPGARQLMQQTLE GNGSELADALKYVDEQMLTGMDASQRQALRPLLVRPLLQAYAVTIQPTAVEVNKIWSAQV HQPFQQSLATKYPFAAGAKIEASPAEIAQFFGPEGAIGKFVTTTLGSLVIRRGDLLSPRA WGDQGLTLSPDFVNGFSQWVAPLSGAAAGGGAGAAQPQTLFQILPQPVSGLTEYMVEIDG QQLRYRNTPPQWSNFVWPNAQGTPGARITAVTFDGRTVELINEPGNFGLERLLSTAQRTK LPDGSFELTWARDNASVTVKLRVIQNTQSGGTGGDSPQGKGLRGTVLPSSVAEIGVPAQS RATPAATAPGAPATSAQGVGK NT seq 3846 nt NT seq  +upstreamnt  +downstreamnt atgcggcgattcttcagtttcctggccgatccgcgcaccctctcggtgatcggcgccatc gcgctcggcgcgttcctcctgatcggcgcgcagacgctcgagatcggcgcgatctgggcg gtcggcatcttcgccgtgctgctgctgttgtggctgctcgtgtggttcatccggcgcatg cgcacccgctcggccaaccgcaagctcggcgacatgctcgaagaccaggccgatgccgcc gtgcgcgacagcgatcccgagcgcaaggccgagatcgacgagctgcgcgggcgcatggtc gaggcggtcaagaccatcaagacgtccaagatcgggcagatgtcgggcagcgaggcgctg tacgagctgccctggtacatggtcatcggcaacccggcggcgggcaagagcagcgccatc ctgaattcgggcctgcagttcccgttcgccgacaagggcaacgcggtgatccagggcatc ggcggcacgcgcaactgcgactggttcttcaccaccgaaggcatcgtgctcgataccgcg ggccgctattcgattcaccaggaagaccgcaaggagtggttcggctttctcgacctgctc aagaagtaccggccgaaggcgccgatcaacgggatcatcatcacggcgagcattcccgag ctgatcggcagccggcccgatttcgcgatccagcttgcgaagaatctgcgccagcgcatg caggagctgaccgagcggctcgaggtgttcgcaccggtctacgtgatgttcaccaaggcc gacctgatcaccggctttgcggagttcttcggcgacagcgacaagatggagcgcgaccgc gtgtggggcgcatcgctgccctacgacggcgacgagaagcaggacgcggtggccctgttc gacaagcgcttcgacgagctctacctgggcctgaaggaaatcagcgtctcgcacttcgcg agccaccgcggcagcgatccgtcgcccgagctcctgatctttccgctcgaattcgcagcc atcaagcccgcgctgcgcgccttcctcgccacgctgttcgagagcaatccgttccagcac aagccggtgttccgcggcttctacttcaccagcgcattgcaagagggcacgatgcgcagc ctgtcgaccgagcgcatcgccaagcgtttcgggctcacgctgaacaacgcggccagcaag tccaaggaaatctattcgcagaacggattcttcctgcgcgacctgttttccaaggtgatc tttgccgacaagaagacggtgcggcagttctccagcccggtgaaggcccgcgtgcgctac gtgagcttctttgccttcgtcgccgtgctggggctgctgctcggcggatggacctggtcg tacctgggcaaccggcagctggtggagaacgtgcaggccgacctcgacaaagtggtcaag ctgcaggccagcgacaacgggctgcgcacgcgcttcgaggcactgggcatcctgcaggac cgcatcgagcaactcgagaaatttcgcaacgaccgtccgctgtcgctctcgctcggcctc taccagggcaaccagctcgaggacaagctcgtcgccgagtattacggcggcgtcaagcag ctgatgctcgcgccggtgtccgacaacctgcaggcgttccttcgcgaggtcaacgcgcat ccggaacggctccggcgtgccgatgcagcgggcaaccctgccgcgccggtcgctgtgtcg gccgccacgccggcaacgccgcccgctgcagagagcggcggcctgtatgcgggctcgtcg ccggccgatgtgcaggacgcctacaacgcgctcaagacgtatctcatgctgtccgacaag cgtcaggtggagaccgcgcacctcacggaccagatatcgcgcttctggcgcggctggctc gaaagcaaccgtggcgacatgccgcgcgccgcggtcatccgcgacgccgaacgcatgatc actttctacctgcgccgcgtgggcgacgacaactggcccgcgctggccgacaccaacctc gcactggtcgagcagacgcgcgacaacctgcgccgcgtggtgcgcggcatgccggcgcgc gagcgggtgtatgccgagatcaaggcgcgtgcctccacacgcttcgctccaatgacggtg gcgcgcatcctgggcgcgacggccggcgccgagagcgagggcaccatcgccggcagcgtc gccatctcgggcgcgttcacgcgcgaggcctggcagcagtacgtggacgacgccatccgt gatgccgccaacaaggaaacatcgagcaaggactgggtgctcaacgtcgcgggcaacgac gacctgacgctcgaaggcagccccgagcagatccgcaagacgctcgccaccatgtacaag ctggagtacgccaaggagtggcagcgcttcctgcagggcatcgcggtcaaggacatgggc agcttcgagcaggccgtggtggcgatgaacctgctgggcgatccgcagaactcgccgatc cgcaaggtcttcgacaccgtctacgaccagacctcgtgggacaacccatcgctggtcaat gccggcctgcagcaggcacgcaccggggcgctgaactggttcaagaacctcttcagtcgc gccacgccttcgcaggtcaacgtgaacatcgacgcgagcggcaaccgcaccgagattccg atgggcccgatcggccgggaattcgcgggcgtcgcgcgcctggtggtcgagcgcgacaac acctcgctcctgcgcggctacctcggcacgctgtcgaagctgcgcgggcgcttcaaccag atcaagaaccagggcgaccccggaccgggcgcgcgccagctgatgcagcagacgctggaa ggcaatggctccgagctggccgatgcgctcaagtacgtcgacgagcagatgctcaccggc atggacgcgtcgcagcgccaggccctccggcctttgctggttcggccgctgctgcaggcc tatgcggtgacgatccagccgacggcggtggaggtcaacaagatctggagcgcgcaggtg catcagccgttccagcagtcgctcgcgaccaagtacccgttcgccgcgggcgcgaagatc gaggcttcgccggcggagatcgcgcagttctttggtcccgaaggcgccatcggcaagttc gtgacgacgacgctgggctcgctggtcatccgccgcggtgacctgctctcgccgcgcgcc tggggcgaccagggcctcacgctgagtcccgatttcgtcaacggcttctcgcaatgggtc gcgccgctgtcgggcgccgcggctggcggaggcgccggtgccgcgcagccgcagacgctg ttccagatcctgccgcagcccgtctcgggcctgacggaatacatggtcgaaatcgatggc cagcagctgcgctaccgcaacacgccgccgcagtggtccaacttcgtgtggcccaacgcg cagggcacgccgggcgcgcggatcaccgccgtcaccttcgacgggcgcaccgtcgagctc atcaacgagccgggtaatttcgggctggagcggctgctcagcacggcccagcgcacgaag ttgccggacggcagcttcgagctcacctgggcgcgcgacaacgcgagcgtgaccgtcaag ctgcgcgtgatccagaacacgcagtcgggcggcacgggcggcgattcgccgcaaggcaag gggctgcgcggcaccgtgctgccttcgtcggtggcggagatcggcgtgcctgcgcaatcg cgcgcaacgcctgcggcaacggcaccgggggcaccggcgacatcggcacagggagttggc aaatga

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