Variovorax paradoxus EPS: Varpa_5545
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Entry
Varpa_5545 CDS
T01392
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K17733
peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpe01002
]
Varpa_5545
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Varpa_5545
Peptidases and inhibitors [BR:
vpe01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Varpa_5545
Peptidoglycan biosynthesis and degradation proteins [BR:
vpe01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Varpa_5545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15_4
VanY
DUF3782
Peptidase_M15_2
Motif
Other DBs
NCBI-ProteinID:
ADU39700
UniProt:
E6VAF6
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Position
complement(6037455..6038300)
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AA seq
281 aa
AA seq
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MIFFALFCYFALMVAALAIFLFPSFRERVLRATITLTTATAVFFIKLGHRFGLVSEASFQ
LVRDGGLGVRTFAVRHRYLLLSGMGLLVIPVMLSVAFGTGRVLFFDDSTATSDPKIEALL
KGEQLVPPPALPPEIFATAEVEQVRPLTKEGSRDWAVLDADFRNRLLLVYKIMKEKHGYD
LALLEGYRSPERQAKLAALGNTVTLAKANQSYHQYGLAADNAFYRNGKLVISERDPWAME
GYRLYGEVAESVGLVWGGRWSSIKDYGHVEYRKPGFKLPRD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgatcttcttcgctctcttttgttattttgccttgatggtggctgcgcttgccatcttc
ttgttcccttcttttcgtgagcgtgtgttgcgagccacgatcactttgacgactgcaact
gcagtcttttttatcaagttaggccatcgattcggacttgtgtccgaagcaagttttcag
ttggtgcgagatggcggtttgggtgtgcgtactttcgccgtacgtcatcgttatctgttg
ttgtcgggcatgggcttgctcgtcattccggtgatgttgagcgtggccttcggaaccgga
cgcgtcctgttttttgatgactcgacggcgacaagcgatccgaagatcgaggcgcttctt
aagggcgagcagctcgtgccgccgcctgcgctgccacctgaaatcttcgcaaccgcagag
gtcgaacaggtccgtccgctcaccaaggaaggcagtcgcgactgggccgtgctcgatgcg
gacttccgcaatcgcctgctcctggtctacaagatcatgaaagagaagcacggctacgac
ctcgcgttgctcgagggttatcgcagtcccgaacggcaggccaaactcgctgcgttgggc
aacacggtgacgctcgccaaggcgaatcaaagctatcatcaatatggacttgcggcagac
aatgcgttctatcgcaatggcaagctggtgatctcggaaagagacccgtgggccatggag
ggctaccgtctttatggcgaggtggccgagtccgtagggcttgtgtggggtggtcgctgg
tcttcaatcaaggactacggtcacgtggagtaccgcaagcccggtttcaaattgccacgc
gactga
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