Variovorax paradoxus EPS: Varpa_5564
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Entry
Varpa_5564 CDS
T01392
Name
(GenBank) Fimbrial protein domain-containing protein
KO
K07345
major type 1 subunit fimbrin (pilin)
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpe02044
]
Varpa_5564
02035 Bacterial motility proteins [BR:
vpe02035
]
Varpa_5564
Secretion system [BR:
vpe02044
]
Chaperone-usher system
Type 1 pilus assembly protein
Varpa_5564
Bacterial motility proteins [BR:
vpe02035
]
Pilus system
Fimbrial proteins
Varpa_5564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MrkDrd
Fimbrial
CopD
DUF2242
Motif
Other DBs
NCBI-ProteinID:
ADU39718
UniProt:
E6VAH4
LinkDB
All DBs
Position
complement(6058487..6059500)
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AA seq
337 aa
AA seq
DB search
MNRSHPFRAVKTARRFLRFAMPALALLGAQGAWAACTVTPGYIEKTVNMAMGRVVIPNDA
AVGTMFKSQLFPLPSSAINKPWTCVGGGSVKGVMLQGIAVPGLDHVFTTAVSGVGIRLSR
YFGATEVSYYPHDRTTTSDFGNFDAASRFQVELFKIAAVTGNGPLAQGTYTQYYSVADNK
SVLTTNLLGEGITIITPSCSVDLGSRNILVEFGKVPQNNFKGRGTTTGDRKFNIKLNCKA
GQNAQNTVYLRMDATQDPSNEQGVLKITQAGASTATGVGIQVVNDKSVPVKFGEDALVGP
SMDGAYVLPYTARYFQTGDKVTPGRANGTATFTLDYK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagccatccattccgcgcagtgaagaccgcgcgccgtttcttgcgattcgcc
atgccggccctcgcgctgctcggtgcgcagggcgcatgggccgcgtgcaccgtcacgccg
ggctatatcgagaagacagtcaacatggcaatgggccgcgtcgtcatcccgaacgatgcg
gcggtgggcacgatgttcaagtcgcaactcttcccgctaccttcgagcgccatcaacaag
ccctggacctgcgtgggcggcggcagcgtgaagggtgtgatgctgcagggcatcgcggtg
ccgggcctggaccatgtgttcaccactgcggtgtccggcgtgggcatccgcctgtcgcgc
tacttcggcgcaaccgaagtcagctactacccgcacgaccgcacgaccaccagtgacttc
ggcaacttcgacgcggcatcgcgcttccaggtcgagctcttcaagatcgccgccgtcacg
ggcaacggcccgctcgcgcagggcacctacacccagtactacagcgtggcggacaacaaa
tcggtgctcaccacgaacctgctgggcgagggcatcaccatcatcacgccctcgtgctcg
gtggacctgggctcgcgcaacatcctggtggaattcggcaaggtgccgcagaacaacttc
aagggcaggggcaccaccacgggcgatcgcaagttcaacatcaagctcaactgcaaggcc
gggcagaacgcgcagaacaccgtctacctgcgcatggacgccacgcaggacccctcgaat
gagcagggggtgctgaagatcacgcaggctggtgccagcaccgccaccggtgtgggcatc
caggtggtgaacgacaagagcgtgccggtgaaattcggtgaagacgcactggtgggcccg
tcgatggacggcgcctatgtgctgccctatacagcgcgctatttccagaccggcgacaag
gtgacgccagggcgtgccaacggcacagccactttcacgctcgactacaaataa
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