Variovorax paradoxus EPS: Varpa_5633
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Entry
Varpa_5633 CDS
T01392
Name
(GenBank) Tripartite ATP-independent periplasmic transporter DctQ component
KO
K11689
TRAP-type transport system small permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_5633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5633
Transporters [BR:
vpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Varpa_5633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Motif
Other DBs
NCBI-ProteinID:
ADU39786
UniProt:
E6VBI6
LinkDB
All DBs
Position
6118057..6118686
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AA seq
209 aa
AA seq
DB search
MQSFLLAVDRFSTWIGKTFAWCALLLTLLISWEVFSRYVLNHPHAWVLDAQIMLYGAMFM
TAGAYTLSKNGHVRGDVLYGFFRPRTQALVDLVLYIVFFLPGIVALTWAGWIYAGESLAI
REQTFSAEPLPLYPFKFIIPLAGFTLLLQGIVEIIRCVQCIRDGAWPSREQDVEEVDVEK
LKEMVHVKDADIAALDRVVVANEAREGSR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctttcctgttggcggtcgaccggttctccacttggatcggcaagaccttcgcc
tggtgcgccctgctgctcacgctcctgatcagctgggaggtgttctcgcgctacgtgctg
aaccatccgcatgcgtgggtgctcgacgcgcagatcatgctgtacggcgccatgttcatg
accgccggggcgtacacgctttccaagaacggccacgtgcgcggcgacgtgctctacggt
ttcttccggccgcgcacgcaggcgctggtcgacctggtgctctacatcgtcttcttcctg
cccggcatcgtcgcgctgacctgggccggatggatctacgccggcgaatcgctcgcgatc
cgggagcagaccttctcggccgagccgctgccgctgtatccgttcaagttcatcattccg
ctcgcgggcttcacgctgctcctgcagggcatcgtggagatcatccgctgcgtgcagtgc
atccgcgacggcgcctggccctcgcgcgagcaggacgtcgaggaagtcgacgtcgagaag
ctcaaggaaatggtgcacgtgaaggacgccgacatcgccgcgctcgaccgcgtggtcgtc
gccaacgaggcacgggagggctcgcgatga
DBGET
integrated database retrieval system
