Variovorax paradoxus EPS: Varpa_5690
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Entry
Varpa_5690 CDS
T01392
Name
(GenBank) osmosensitive K channel signal transduction histidine kinase
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Varpa_5690
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpe01001
]
Varpa_5690
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpe02022
]
Varpa_5690
Enzymes [BR:
vpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Varpa_5690
Protein kinases [BR:
vpe01001
]
Histidine kinases
OmpR family
Varpa_5690
Two-component system [BR:
vpe02022
]
OmpR family
KdpD-KdpE (potassium transport)
Varpa_5690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
HATPase_c_2
GAF_2
LCM
Usp
Motif
Other DBs
NCBI-ProteinID:
ADU39843
UniProt:
E6UVH8
LinkDB
All DBs
Position
complement(6180574..6183321)
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AA seq
915 aa
AA seq
DB search
MHDARPDPDALIAQLRNDEARALRGKLRIYFGASAGVGKTWAMLSAAQRERTAGRDVLIG
VVETHGRSETAALLAGLDTLPLRELAYRGRTLAEFDLDAALARKPAVLLVDELAHTNAPG
SRHAKRWQDVQELLAAGIEVWSALNVQHLESLNGTVGAITGVRVHETVPDTVLDEADEVV
LVDVTPDELTARLAAGKVYLPQQAERAAQNFFRKGNLIALREIALRRTAEHVEDDVRGWR
VEQSGAVGNGQGGASLQAWNTSGAILACVGPHEGAAQTVRTAARLAGQLNVRWHAAYVET
PRLQRLAAAERDRILAVLKLAEELGAATAVLTGSDVAEQLSEQARRLNCATLVMGRSEPV
GGWRRWWPATRVSLPRALAQRAPALDILEVGRADSARRLARTPLNTPRADDDDHEKAPIH
WPGYAWATATSVALTLLCTPLANVLELSNIVMLFLLGVVGVAMRFGRGPSALAALLNVAA
FDYFFVPPRLSFAVSDVQYVLTFAIMLGVGLLVGQLTAGLRFAAGVSTSRERRARSLFEL
TRELSAALESTQVVTLGAAAVQGHFGGHALVLVTDAADQLVLPTEPPEGFDAQVADWAFR
HGQPAGLATATLAAQPWHYVPLKAPMRVRGVLALSPAQPRWLLIPEQAQQLDTLARQIAI
ALERVHYVEVAQQAVVEMESERLRNALLGAISHDVRTPLTALIALAESLQTLPAEEHGNA
ARAIVAQAHELHALVNNLLDMARLESGIAGGAVNLRRDWQSVEEVVGSSIRAAHTSLGDA
VVQTTLDADLPLVEFDAVLIERVLVNLLENATKYGAPPIVVGARAEPGTLVLTVRDHGPG
LPAALLGHEQKLFDKFTRGEAESATPGVGLGLAICRAVVSAHGGEITAANARDGGAEFTV
TLPRREPPEPAEAQL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcccgccccgaccccgatgccctgattgcgcaactgcgcaacgacgaggcg
cgtgcactgcgcggcaagctgcgcatctacttcggcgccagcgccggtgtcggcaagacc
tgggcaatgctgagtgcggcccagcgcgagcgcaccgcggggcgcgatgtactcatcggt
gtggtcgagacgcacggccgcagcgaaaccgccgcgctgctcgcggggctcgatacactg
ccgctgcgcgagctggcctaccgcggccgcacgctcgccgagttcgacctcgacgccgcg
ctcgcacgcaagcccgccgtgctgctggtcgacgaactggcccacaccaatgcccccgga
tcgcgccacgccaagcgctggcaggacgtgcaggagctgctggccgcaggcatcgaggtg
tggtcggcgctcaatgtgcagcacctcgaaagcctcaacggcaccgtcggcgcgatcacc
ggcgtgcgtgtgcacgagacggtgcccgacaccgtgctggacgaggccgacgaagtggtg
ctggtcgacgtcacgcccgacgaactcaccgcgcggctcgcagccggcaaggtttatctg
ccgcagcaggctgagcgcgccgcgcagaatttctttcgcaagggcaacctgatcgcgctg
cgcgagattgcgctgcgccgcaccgccgagcatgtggaagacgatgtgcgcggctggcgg
gtcgagcagtccggggcggtcggcaacgggcagggcggcgcttcgctgcaggcctggaac
acctcgggcgcgatcctcgcctgcgtcggtccgcacgaaggcgcggcacagacggtgcgc
accgcggcgcggctcgcgggccagctcaacgtgcgatggcatgcggcgtacgtcgaaacg
ccgcggctgcagcgcctcgctgccgcagagcgcgaccgcatcctcgcagtgctcaagctc
gccgaggaactgggcgctgccaccgcggtgctcacgggttccgatgtggccgagcaactg
tccgagcaggcccgccggctcaactgcgcgacgctggtgatggggcggtccgagccggtc
ggcggatggcgtcgttggtggcccgccacgcgggtctcgttgccgcgcgcgctggcgcaa
cgcgcgcccgcgctcgatatcctggaagtcggtcgtgccgacagcgcgcgccgcctcgcg
cgcacgccgctcaacacgccgcgcgccgacgacgacgatcacgagaaggcgccgatccac
tggcccggctacgcgtgggcgacggccaccagcgtggcactcaccctgctctgcacgccg
ctcgccaacgtgctcgaactctcgaacatcgtgatgctgttcctgctcggcgtggtcggt
gtcgcgatgcgcttcgggcgcgggccttcggcgctcgcggccttgctcaacgtggccgcg
ttcgattacttcttcgtgccgccgcgcctgtcgttcgcggtgagcgacgtgcagtacgtg
ctgaccttcgcgatcatgctcggcgtcggcctgctggtggggcagctcaccgcggggctg
cgctttgcggccggcgtatcgaccagccgcgaacggcgtgcgcgctcgctgttcgaactc
acgcgcgaactctcggcggcgctggagagcacgcaggtcgtcacgctcggcgccgccgcg
gtgcagggccacttcggcggccatgcgctggtgctggtgaccgatgcggccgatcagctc
gtgctgccgacagagccgcccgagggcttcgatgcgcaggtcgccgactgggccttccgc
cacggtcaacctgcaggccttgcgaccgccacattggctgcgcagccttggcactacgtg
ccattgaaggcgccgatgcgtgtgcgcggggtgctggcactgtcgcccgcgcagccgcgc
tggttgctgattccggagcaggcgcagcagctcgacacgctggcccggcagatcgcgatc
gcgctggagcgcgtgcactacgtcgaggtggcgcagcaggccgtggtcgagatggaatcg
gagcgcctgcgcaatgccctgctcggcgcgatctcgcacgacgtgcgcacgccgctcacc
gcgctgatcgcgctggccgaatcgctgcagacgctgccggccgaagaacacggcaacgcg
gcacgcgccatcgttgcgcaggcgcacgagctgcacgcgctggtcaacaacctgctcgac
atggcgcggctcgaaagcggcatcgcgggcggcgcggtgaacctgcggcgcgactggcaa
tcggtcgaggaggtcgtgggatcgtcgatccgcgcggcgcacacgtcgctgggcgacgcc
gtcgtgcagaccacgctcgatgcggaccttccgctggtcgaattcgatgcggtgctgatc
gaacgcgtgctcgtcaacctgctggagaacgccaccaagtacggtgcgccacccatcgtg
gtgggcgcacgcgccgaacccggcacgctggtgctcacggtgcgcgaccacgggccgggc
ctgcctgccgcgctgctgggccacgaacagaagctgttcgacaagttcacccgcggcgag
gccgaatcggccacaccgggcgtcggcctggggctcgcgatctgccgcgcggtggtgagc
gcgcacggcggcgaaatcacggcggccaacgcgcgcgacgggggtgcagaattcaccgtc
accctgccacgccgcgagccgcccgaaccggccgaagcccaactctga
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