Variovorax paradoxus EPS: Varpa_5738
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Entry
Varpa_5738 CDS
T01392
Name
(GenBank) inner-membrane translocator
KO
K10544
D-xylose transport system permease protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Varpa_5738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5738
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Varpa_5738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADU39890
UniProt:
E6UWG0
LinkDB
All DBs
Position
complement(6245339..6246529)
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AA seq
396 aa
AA seq
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MSNETPGWWRRTGVDLRLILMCVLLVVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVS
TVMVLIIVARHIDLSVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLT
AVLGVPSFVVTLGGLMSFRGAAFLVADGKTQPVNDEFFQRLGGGYDGGIGTTASWVIAAL
VALVLFGRMVQKRRARQRYDMPTEPLWLDVLITAVPVAVVFGFAAVMNNYQISSKSEPQG
IPIPVLIWAVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLV
TIAAIVSIARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSG
MLLLDVPIGKRMVIIGQVLIVAVVFDVLYRRKFGEN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgaaactccgggatggtggcgccgcacgggcgtcgacctgcgcctgatcctg
atgtgcgtgctgctggtcgtcatggcggtggccttcagcgtcatgtcgggcggcgtgttt
ctctcgcccgagaatctctacaacgtcgcgcagcagactgccgtggtgggcatcgtctcc
accgtgatggtgctgatcatcgtggcgcgccacatcgacctgtcggtcggttcggtgatg
ggtttcgtgggggtgctcatcgcgtacctgcaatacacctcgggctggtcgtggcccacg
gcctgcctcgcgggcctggccgtggcgctcctggtgtcgatctatcaaggctggctcacc
gcggtgctcggcgtgccctcgttcgtggtcacgctcggcggtctcatgtcgttccgcggc
gcggcttttctcgtcgccgacggcaagacgcagccggtgaacgacgaattcttccagcgc
ctgggcggcggctacgacggcggcatcggcaccaccgcgagctgggtgatcgcggcgctg
gtcgcgctcgtgctcttcggccgcatggtgcagaagcgccgcgcgcgccagcgctacgac
atgccgaccgagccgctgtggctcgacgtgctcatcacggccgtgccggtggcggtggtc
ttcggcttcgccgcggtcatgaacaactaccagatctcgtcgaagtcggagccgcagggc
attccgattccggtgctgatctgggcggtggtcgccatcgtgctgtcgttcatcgtgcac
cgcacgcgcttcgggcgctacgtgttcgcgatgggcggcaatcccgatgcggctgcgctg
gtcggcattccggtcaagcgcgtcacgctgatgctgttcgcgctgctggcggtgctggtc
accatcgcggccatcgtgtcgatcgcgcggctcaacgccggcaccaattcattgggcacc
ggcatggagctctacgtgatcgcggcggccgtcatcggcggcacggcgctcgcgggcggc
agcggctcgatcttcggttcggtgctgggcgcgctcatcatgcagtcgctcgacagcggc
atgctgctgctcgatgtgcccatcggcaagcgcatggtcatcatcggccaggtgctgatc
gtggccgtggtgttcgacgtgctctaccgccgcaagttcggggagaactga
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