Variovorax paradoxus EPS: Varpa_5783
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Entry
Varpa_5783 CDS
T01392
Name
(GenBank) hemagluttinin domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_5783
Transporters [BR:
vpe02000
]
Other transporters
Pores ion channels [TC:
1
]
Varpa_5783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
ESPR
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
ADU39935
UniProt:
E6UWK5
LinkDB
All DBs
Position
complement(6284978..6287344)
Genome browser
AA seq
788 aa
AA seq
DB search
MNKTFQTIWNEPLGAWVAASELTSARGKPSKSKSTVVAAAAREASSGRMGEGDGRSIGAL
THATMALILVAGGLAGSNVVHADYARGGGRAEGGSIAIGSSLADAFTGTGPLAGNGGVAI
GASAGTIRTAAQGSNSVAIGNGANASGAATVAFGQASAASGAFTTAIGSGAQATANNSTS
IGSTTSKNPADVTRASGDGSVAIGANEVRGAQSLAANSVAIGAESKVSAAAPSGVAIGQN
ANATGGAGAMAFGQNSFASGFNATAIGVGTRADGGGATAFGNGANAVFGDDMAFGTNALA
SGDSVGLKSATAFGNRAQAKGVVTAAFGDSAQAISYGAIAIGGGAKSDTGPDGKNGIAIG
TIASVTGDRGVAIGAAAKAAGDRSTALGWTSNAAGSGSTAIGANASGGAAALGANSVALG
GQSSVAATATSGIAVGRGAVVNSIFGLAIGDGASASGSGSGIIAIGNGAKASVGTSTAIG
VNANAANTDATALGNGALASGKQDTAIGVTARATGGSSSAFGNAANATGGNSLALGVGNV
ASNFAAVAVGNLSKASGLRSVALGDQANASNTSAIAFGTNANATQSGAIAVGQGAQGAGV
NAVALGAGALVLTDNSVALGSGSTTFATSPTGKGFMTGAAAPASEVSVGASGAAPTRRIT
NLADGAAQQDAVTVAQLSTSNTSLSTSITSLSTLTSSGLSTATSSINSLSTSTSSGLSTA
TSSIGSLSTSTSSGLSTAASSIGSLSTSTSSGLSTATSGIASLSTSTSSGLSTATSSIGS
LSTSTSSV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacttttcaaactatctggaacgaaccgcttggtgcctgggttgccgcgtca
gaactcacttcggcacgaggcaagccgtcgaagagcaagagcacggtggtggcggctgcg
gcacgggaagcatcttccgggcgcatgggggagggcgacgggcgatcgatcggagccttg
acgcatgcgacgatggcgctgatcctggtggccggtgggttggctgggagcaatgtggtc
catgctgactatgcgagagggggcggcagggcggagggcggcagtattgccatcggttcg
agcctcgccgacgcattcaccggaaccggcccccttgcgggcaacggaggcgttgcgatc
ggcgcctccgcaggcaccattcgtacggctgcgcagggctcaaattcagtggcgattgga
aatggagccaatgcatcgggagccgcgacggtggccttcgggcaggcgtctgccgccagc
ggtgcgtttacgaccgcaatcggtagcggtgcgcaggcaactgcgaataattcgacgtcg
atcggctcgacgacgtccaaaaatcctgccgacgtcacgcgggcatccggtgacggctcc
gttgcaattggcgcaaatgaagttcgaggcgcccaatcgctggcggccaattcggttgcc
attggtgctgaatccaaggtgtccgctgcggcgccgtcgggtgttgccattggccagaat
gccaacgccaccggaggcgcgggggcaatggctttcgggcagaacagtttcgccagcggc
ttcaatgcgacggctatcggtgtaggcaccagggcagacggtggtggcgcgacggctttc
ggcaacggcgccaatgcagtctttggcgacgacatggccttcggcaccaatgcacttgcc
agtggcgacagcgtgggcttgaagtccgcgacggcatttggtaacagggcgcaggcgaag
ggcgttgtcaccgccgcattcggcgacagtgcgcaggccatttcctacggcgccatcgcc
atcggcggaggcgcaaagagcgataccggtcctgatggaaaaaacggcatcgcgattggc
acgattgcgtctgtcactggagatcgcggcgttgccatcggcgctgcagcgaaggccgca
ggagatcgttccacggctttgggctggacgtcgaatgcagccggaagcggatccaccgca
atcggcgccaatgcttccggcggggcggcagcgctcggggccaattcggttgcccttggc
ggacagtccagcgtagctgcgacggcaacctccggcatcgcggtcggtcgtggtgcggtc
gtcaacagcatctttggcctcgccatcggtgatggggcgagtgcctccggcagcggcagc
ggcatcatcgccatcggcaatggagccaaggcgagcgttgggaccagtacggcgattggc
gtcaacgccaatgcggccaacaccgacgcgacggccctcggcaacggcgcgttggcatcg
gggaagcaggacacggcgattggcgtcaccgccagagccactggcggttctagctccgcg
ttcggcaatgccgccaatgccaccggcggtaattccctggcactgggtgtcggcaacgtc
gcgtcgaattttgctgcggtggctgtgggcaatctgagcaaggcgtcgggcttgcgcagc
gtcgcattgggcgaccaggccaacgccagcaataccagcgcaatcgcctttggcaccaat
gccaatgcgacccagtcgggtgccatcgcggtggggcagggggctcaaggcgcgggcgtg
aacgccgtcgccctgggcgctggagcgctggtgctgaccgacaactcggtggcgctgggt
tcgggctcgaccaccttcgcgacttcgccgactggcaagggcttcatgaccggcgcggca
gctccggcgtcggaagtctcggtgggggcgtccggcgccgcgccgacgcgacgcatcacc
aacctggccgatggcgcggcacagcaggacgcggtgactgtggcgcagctgagcaccagc
aacaccagcctctcgaccagcatcacgagtctgtcgaccttgacatcgagtgggttgagc
acggccacaagcagcatcaacagcctgtcgacatcgacctcctcgggtctgagcaccgcg
accagcagcatcggtagcctgtcgacgtctacttcgagtggcttgagcaccgctgccagc
agcatcggcagcctgtcgacctccacctcgtccggtctgagcacggccaccagcggcatc
gctagcctgtcgacatcgacgtcgtctggcctgagcactgctacgagcagcatcggcagc
ctgtcgacctccacctcgtcggtctga
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